Gene detail information of Glyur000164s00014478 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49290.2 | 4.00E-83 | ABL interactor-like protein 2 |
| NR | XP_004498509.1 | 0 | PREDICTED: protein ABIL2-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q9M3A3|ABIL2_ARATH | 3.00E-135 | Protein ABIL2 |
| trEMBL | tr|G7I3G8|G7I3G8_MEDTR | 0 | ABIL1-like protein {ECO:0000313|EMBL:AES58753.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00164 | 50428 | 54406 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.998 |
| SRR1783600 | control | 16.556 |
| SRR1783602 | moderate drought stress | 7.075 |
| SRR1811619 | moderate drought stress | 7.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.770 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.991 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.063 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.061 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.895 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.830 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.300 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.416 |
| SRR2868004 | Drought Stress (root) | 18.644 |
| SRR2967015 | Control (root) | 20.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.086 |
| SRR9715740 | Leaf | 0.354 |
| SRR9715741 | Leaf | 0.761 |
| SRR9715739 | Root | 1.820 |
| SRR9715742 | Root | 2.535 |
| SRR9715743 | Root | 3.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.588 |
| SRR8749028 | MeJA induced 9h | 3.930 |
| SRR8749029 | MeJA induced 9h | 4.456 |
| SRR8749030 | Uninduced | 0.664 |
| SRR8749031 | Uninduced | 0.073 |
| SRR8749032 | Uninduced | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.554 |
| SRR8400027 | Control - Root | 53.350 |