Gene detail information of Glyur000163s00011099 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03440.2 | 3.00E-22 | |
| NR | XP_007144345.1 | 1.08E-46 | hypothetical protein PHAVU_007G148400g [Phaseolus vulgaris] |
| trEMBL | tr|V7BFK3|V7BFK3_PHAVU | 4.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:ESW16340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00163 | 54529 | 57547 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000163s00011099.1 | PF13259.1 | DUF4050 | 10 | 105 | 8.60E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.657 |
| SRR1783600 | control | 8.224 |
| SRR1783602 | moderate drought stress | 7.973 |
| SRR1811619 | moderate drought stress | 7.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.069 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.101 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.591 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.083 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.047 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.575 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.645 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.422 |
| SRR2868004 | Drought Stress (root) | 21.754 |
| SRR2967015 | Control (root) | 29.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.067 |
| SRR9715740 | Leaf | 14.494 |
| SRR9715741 | Leaf | 14.611 |
| SRR9715739 | Root | 3.052 |
| SRR9715742 | Root | 2.783 |
| SRR9715743 | Root | 4.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.794 |
| SRR8749028 | MeJA induced 9h | 26.673 |
| SRR8749029 | MeJA induced 9h | 32.216 |
| SRR8749030 | Uninduced | 10.299 |
| SRR8749031 | Uninduced | 4.633 |
| SRR8749032 | Uninduced | 8.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.947 |
| SRR8400027 | Control - Root | 18.758 |