Gene detail information of Glyur000163s00011091 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36840.1 | 2.00E-151 | ACT-like superfamily protein |
| NR | XP_003554396.1 | 0 | PREDICTED: uncharacterized protein LOC100818216 [Glycine max] |
| COG | YP_006982660.1 | 1.00E-08 | PII uridylyl-transferase [Gluconobacter oxydans H24] |
| Swissprot | tr|Q9SJM1|ACR10_ARATH | 0 | ACT domain-containing protein ACR10 {ECO:0000305} |
| trEMBL | tr|I1NAC0|I1NAC0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36910.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00163 | 16997 | 20115 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000163s00011091.1 | PF01842.20 | ACT | 132 | 190 | 2.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.363 |
| SRR1783600 | control | 10.414 |
| SRR1783602 | moderate drought stress | 11.085 |
| SRR1811619 | moderate drought stress | 10.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.109 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.088 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.327 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.951 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.875 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.718 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 50.189 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 49.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.996 |
| SRR2868004 | Drought Stress (root) | 21.598 |
| SRR2967015 | Control (root) | 22.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.740 |
| SRR9715740 | Leaf | 12.857 |
| SRR9715741 | Leaf | 10.007 |
| SRR9715739 | Root | 3.463 |
| SRR9715742 | Root | 4.857 |
| SRR9715743 | Root | 5.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.245 |
| SRR8749028 | MeJA induced 9h | 5.807 |
| SRR8749029 | MeJA induced 9h | 2.423 |
| SRR8749030 | Uninduced | 1.889 |
| SRR8749031 | Uninduced | 0.615 |
| SRR8749032 | Uninduced | 0.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.707 |
| SRR8400027 | Control - Root | 23.831 |