Gene detail

Gene detail information of Glyur000163s00011089

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G39210.1	Major facilitator superfamily protein
NR	XP_003521414.2	PREDICTED: uncharacterized protein LOC100797779 [Glycine max]
trEMBL	tr\|I1JPR2\|I1JPR2_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G34230.1}

Sequence

Transcript Sequence

>Glyur000163s00011089.1
ATGGTGGTTGCAGAGTTCACCAGCGGCACCCTCGGTGGTTGGAGAGGAATGAAGTCCTTCACCTACCACGTCCTAACCGGCCGTTGGTTCATGCTATTCGCCTCTGTACTAATCATGGCCGTTGCAGGGGCAACCTACATGTTCGGTCTATACTCCAACGAAATCAAAACCTCTCTTGGCTACGACCAAACAACCCTCAACCTTCTCAGCTTCTTCAAAGACCTCGGTGCCAACGTTGGTGTCATCTCGGGGTTAATCAACGAGGTGACACCACCATGGGTTGTTCTCTCAACCGGTGTCATCATGAACTTCTTGGGCTACTTCATGATATGGCTCGCCGTCACATCTCGAATCCCCAAACCCCAAATTTGGCAAATGTGTCTCTACATTTGCATTGGCGCAAATTCTCAAACTTTCTCCAACACCGGTGCTTTGGTCACAGCTGTGAAGAATTTCCCAGGTAGCCGTGGAAGTGTCTTGGGACTTCTCAAAGGCCATGTTGGTCTAAGTGGTGCCATAATCACACAGCTATATCATTTTTTGTATGGTGATAATGACACAAGATCTCTCATTTTGCTCATTGCTTGGCTTCCTGCTGCTGTTTCCTTCCTTTTCCTCCCAACAATTNGGATTTTGAGCATCCAAAACCAACCCAAGGAGCGAAAAGTTTTCTACAACCTTTTATATATTTCACTTGGTCTAGCTGGGTTTCTCATGGTACTCATCATTATCCAGAACAAATTGAATTTTTCAAGGATTGAATATGTAGTCGTTGGCATTGGGGTAATTCTCTTGCTTCTCNTCCCACTTGCTGTTGTATTCAGAGAGGAATTCAACCTCTTGAAGGANAAGAACAAGAGTACTACTACCCAAGAAGTCACTGAAGTAGTCACTGAAGTCCCACATCGAAATATGGCACCACCGCAACAAGAACCACAAGATGTAGTGGCACCACCACCACCACCACCACCACCAACAACAACAACAACAACCACCTCAACCTCACACAAGAAGAAAAAAAGTTCTTGTTTTGGCAACATATTCAAACCCCCAAACAGGGGAGAAGACTACACCATTTTGCAAGCCCTGTTCAGTATTGACATGTTGATTCTCTTCGTTGCAACAACGTTTGGTGTTGGTGGAACATTAACAGCAATTGATAATTTGGGACAAATTGGGCACTCATTGGGATACCCAAACAAGAGCACCACAACCTTTGTGTCCCTAGTGAGCATATGGAACTACCTAGGACGAGTCGTTGCTGGCTACGCCTCAGAAATCTTCTTAACCAAATACAAATTCCCACGTCCCTATATGCTCACTCTAGTTATGCTTCTCTCTTGTGTTGGCCACATTCTCATAGCACTCGGAATCCCAAACTCNCTCTACTTGGCTTCGGTTATCATTGGGTTCTGTTTTGGAGCTCAATGGCCGTTGATGTTTGCAATCATATCAGAGATATTTGGCCTCAAATACTACTCAACTTTATACAACTTTGGGGCCGTGGCAAGCCCAGTTGGATCGTACATACTAAACGTGAGGGTTACTGGGTATTTGTATGATAAAGAGGCTTTGAAATTGTTGGAGGCTAAGGGACTCGAAAGAGAAGAAGGGAAGGACCTGACTTGTGTGGGAGCACAATGCTATAGGATGGCTTTTATCATAATCACGGCATCGACGTTTGTTGGGTGTTTTGTTTCCTTCATTCTGGCGCTTNGGACTAGGAAATTTTACAAGGGTGACATCTATAGGAAGTTCAGGGAAGAACTTGAAGCTGCAGAGACAGAGATGGGGAATACTGCCAAAACTACTGGTGGAGGTGGTGCTGGAACTGGAACTGGAACTGGAACTGAAGTGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00163	3516	5375	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000163s00011089.1	PF06813.8	Nodulin-like	28	274	3.10E-89

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.020
SRR1783600	control	0.020
SRR1783602	moderate drought stress	1.166
SRR1811619	moderate drought stress	1.242

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.457
DRR006520	Root Summer glycyrrhizin high producing strain	7.711
DRR006521	Root Winter glycyrrhizin high producing strain	2.098
DRR006522	Root Winter glycyrrhizin high producing strain	2.040
DRR006523	Root Summer glycyrrhizin low producing strain	8.603
DRR006524	Root Summer glycyrrhizin low producing strain	8.451
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.205
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.640

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.306
SRR2868004	Drought Stress (root)	1.458
SRR2967015	Control (root)	7.577

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.937
SRR9715740	Leaf	55.285
SRR9715741	Leaf	49.264
SRR9715739	Root	74.849
SRR9715742	Root	54.280
SRR9715743	Root	54.735

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.451
SRR8749028	MeJA induced 9h	0.406
SRR8749029	MeJA induced 9h	0.160
SRR8749030	Uninduced	0.197
SRR8749031	Uninduced	0.058
SRR8749032	Uninduced	0.229

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.613
SRR8400027	Control - Root	2.813