Gene detail information of Glyur000162s00009930 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10750.1 | 4.00E-115 | Protein of unknown function (DUF1336) |
| NR | AFK36626.1 | 1.90E-164 | unknown [Lotus japonicus] |
| Swissprot | tr|Q8VZF6|EDR2L_ARATH | 2.00E-60 | Protein ENHANCED DISEASE RESISTANCE 2-like |
| trEMBL | tr|I3S8N4|I3S8N4_LOTJA | 7.00E-165 | Uncharacterized protein {ECO:0000313|EMBL:AFK36626.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00162 | 238330 | 239199 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000162s00009930.1 | PF07059.7 | DUF1336 | 45 | 259 | 4.50E-75 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.259 |
| SRR1783600 | control | 20.275 |
| SRR1783602 | moderate drought stress | 12.500 |
| SRR1811619 | moderate drought stress | 14.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.855 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.785 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.726 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.163 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 54.256 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.972 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.767 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.714 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.654 |
| SRR2868004 | Drought Stress (root) | 19.869 |
| SRR2967015 | Control (root) | 24.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.241 |
| SRR9715740 | Leaf | 12.060 |
| SRR9715741 | Leaf | 15.967 |
| SRR9715739 | Root | 31.206 |
| SRR9715742 | Root | 56.498 |
| SRR9715743 | Root | 50.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.891 |
| SRR8749028 | MeJA induced 9h | 4.296 |
| SRR8749029 | MeJA induced 9h | 6.676 |
| SRR8749030 | Uninduced | 1.413 |
| SRR8749031 | Uninduced | 0.326 |
| SRR8749032 | Uninduced | 1.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.080 |
| SRR8400027 | Control - Root | 26.322 |