Gene detail information of Glyur000162s00009925 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24860.1 | 2.00E-37 | DnaJ/Hsp40 cysteine-rich domain superfamily protein |
| NR | XP_010929187.1 | 2.68E-08 | PREDICTED: uncharacterized protein LOC105050750 isoform X2 [Elaeis guineensis] |
| trEMBL | tr|G7J9S8|G7J9S8_MEDTR | 5.00E-55 | Tsi1-interacting protein TSIP1 {ECO:0000313|EMBL:AES73528.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00162 | 216746 | 221141 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.684 |
| SRR1783600 | control | 4.217 |
| SRR1783602 | moderate drought stress | 4.298 |
| SRR1811619 | moderate drought stress | 4.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.947 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.350 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.628 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.649 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.884 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.560 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.424 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.684 |
| SRR2868004 | Drought Stress (root) | 10.174 |
| SRR2967015 | Control (root) | 15.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.405 |
| SRR9715740 | Leaf | 15.159 |
| SRR9715741 | Leaf | 17.687 |
| SRR9715739 | Root | 3.658 |
| SRR9715742 | Root | 10.300 |
| SRR9715743 | Root | 7.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.055 |
| SRR8749028 | MeJA induced 9h | 22.307 |
| SRR8749029 | MeJA induced 9h | 35.330 |
| SRR8749030 | Uninduced | 38.066 |
| SRR8749031 | Uninduced | 42.462 |
| SRR8749032 | Uninduced | 58.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.755 |
| SRR8400027 | Control - Root | 16.189 |