Gene detail information of Glyur000162s00009910 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31805.1 | 3.00E-06 | WRKY family transcription factor |
| NR | AES73549.2 | 1.47E-73 | hypothetical protein MTR_3g106030 [Medicago truncatula] |
| Swissprot | tr|Q6NQ99|POLAR_ARATH | 1.00E-25 | Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION |
| trEMBL | tr|G7J9U9|G7J9U9_MEDTR | 5.00E-74 | Uncharacterized protein {ECO:0000313|EMBL:AES73549.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00162 | 159805 | 162801 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.349 |
| SRR1783600 | control | 1.431 |
| SRR1783602 | moderate drought stress | 1.346 |
| SRR1811619 | moderate drought stress | 1.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.122 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.077 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.337 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.588 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.158 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.051 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.626 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.033 |
| SRR2868004 | Drought Stress (root) | 4.221 |
| SRR2967015 | Control (root) | 4.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.096 |
| SRR9715740 | Leaf | 1.577 |
| SRR9715741 | Leaf | 2.186 |
| SRR9715739 | Root | 0.324 |
| SRR9715742 | Root | 1.059 |
| SRR9715743 | Root | 1.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.859 |
| SRR8749028 | MeJA induced 9h | 3.314 |
| SRR8749029 | MeJA induced 9h | 1.644 |
| SRR8749030 | Uninduced | 0.593 |
| SRR8749031 | Uninduced | 0.980 |
| SRR8749032 | Uninduced | 0.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.709 |
| SRR8400027 | Control - Root | 1.550 |