Gene detail information of Glyur000162s00009891 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25170.1 | 9.00E-82 | PPPDE putative thiol peptidase family protein |
| NR | AFK47902.1 | 3.67E-136 | unknown [Lotus japonicus] |
| Swissprot | tr|Q93VG8|PPDEX_ARATH | 3.00E-69 | DeSI-like protein At4g17486 |
| trEMBL | tr|I3T5W0|I3T5W0_LOTJA | 1.00E-136 | Uncharacterized protein {ECO:0000313|EMBL:AFK47902.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00162 | 20791 | 22821 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000162s00009891.1 | PF05903.9 | Peptidase_C97 | 18 | 150 | 2.50E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 50.678 |
| SRR1783600 | control | 50.956 |
| SRR1783602 | moderate drought stress | 39.910 |
| SRR1811619 | moderate drought stress | 39.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 54.238 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 53.447 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.355 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.586 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 56.196 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.357 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.933 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.761 |
| SRR2868004 | Drought Stress (root) | 70.126 |
| SRR2967015 | Control (root) | 71.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.558 |
| SRR9715740 | Leaf | 16.471 |
| SRR9715741 | Leaf | 23.816 |
| SRR9715739 | Root | 15.409 |
| SRR9715742 | Root | 23.997 |
| SRR9715743 | Root | 23.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.039 |
| SRR8749028 | MeJA induced 9h | 11.870 |
| SRR8749029 | MeJA induced 9h | 6.991 |
| SRR8749030 | Uninduced | 11.891 |
| SRR8749031 | Uninduced | 6.202 |
| SRR8749032 | Uninduced | 3.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.534 |
| SRR8400027 | Control - Root | 48.033 |