Gene detail information of Glyur000162s00009890 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11000.1 | 2.00E-56 | Plant protein of unknown function (DUF868) |
| NR | XP_003603315.1 | 1.70E-167 | hypothetical protein MTR_3g106250 [Medicago truncatula] |
| trEMBL | tr|G7J9W6|G7J9W6_MEDTR | 6.00E-168 | DUF868 family protein {ECO:0000313|EMBL:AES73566.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00162 | 14052 | 15095 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000162s00009890.1 | PF05910.7 | DUF868 | 35 | 346 | 1.60E-77 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.106 |
| SRR1783600 | control | 19.844 |
| SRR1783602 | moderate drought stress | 20.833 |
| SRR1811619 | moderate drought stress | 20.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.106 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.084 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.243 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.990 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 69.028 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 71.033 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.246 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.459 |
| SRR2868004 | Drought Stress (root) | 39.544 |
| SRR2967015 | Control (root) | 38.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.342 |
| SRR9715740 | Leaf | 24.213 |
| SRR9715741 | Leaf | 30.017 |
| SRR9715739 | Root | 84.924 |
| SRR9715742 | Root | 94.114 |
| SRR9715743 | Root | 91.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.197 |
| SRR8749028 | MeJA induced 9h | 63.023 |
| SRR8749029 | MeJA induced 9h | 52.083 |
| SRR8749030 | Uninduced | 98.996 |
| SRR8749031 | Uninduced | 41.636 |
| SRR8749032 | Uninduced | 38.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.838 |
| SRR8400027 | Control - Root | 49.908 |