Gene detail

Gene detail information of Glyur000161s00011287

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G66658.2	0	aldehyde dehydrogenase 22A1
NR	XP_004487758.1	0	PREDICTED: aldehyde dehydrogenase 22A1-like [Cicer arietinum]
COG	YP_003392912.1	3.00E-83	aldehyde dehydrogenase [Conexibacter woesei DSM 14684]
Swissprot	tr\|Q0WSF1\|AL221_ARATH	0	Aldehyde dehydrogenase 22A1 (Precursor)
trEMBL	tr\|A2Q2X1\|A2Q2X1_MEDTR	0	NAD-dependent aldehyde dehydrogenase family protein {ECO:0000313\|EMBL:AES64997.1}

Sequence

Transcript Sequence

>Glyur000161s00011287.1
TGTTTGCAAGTTTCCACTCACCTTTGCCCATAGTATCAATATCAATATCTCATCACCTCAAAGCTTCCCCAGATTCTTTCACTGTCTTTCGAGCACTGTCCTGAAAGAGGAATAGAACTCTCTAGAAGCTTCCTGGAAACCCTAGCGAGGTGGTTTTCTTCGAAGAAAGAGTCTCGCTCTGAAATCTGCTGCGAAGTTCCAATCCAATGGCGTTCTGGTGGCCCTTGCTCGTTCTAGCATTCGCTTTCGGCATCTGCAAGTTCCTCCTCATACTCATTCCTCCCAAGGTTCCTTCCATCGACGTTGACGCTTCCGATGTGTTGGACGATGGAAACCAAGCACAGGAGAACAGCTTCATATATGTGCCTCCCAGGGGAGCGGCNCAGCAGTCGGCCAAGAAAGTTCAGTGCTATGAGCCTGCTACCATGAAATATTTGGGATATGTTCCTGCATTGACTCCAGATGAGGTCAAGGAGCAAGTGGAAAAAGTACGGAAGGCACAAAAAATGTGGGCAAAGACCAGCTTTAAGCAAAGACGCCAGTTTTTGCGTATACTTTTGAAGTATATAATTAAACATCAAGCACTTATATGCGAAATATCTTCACGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACATGTGAGAAGATCAATTGGCTACTGTCAGAGGGCGAGCAATGGCTAAAGCCTGAGTACCGATCCTCTGGAAGATCAATGTTTCATAAGAGTGGCAGAGTAGAATTTCACCCACTTGGTGTTATTGGCGCCATTGTGTCATGGAACTATCCTTTCCATAATATTTTTAACCCTATGCTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGATTTCAGAACATGCAAGTTGGTCAGGATGCTTTTACTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGGGCTCCAGAGGACCTTGTTGAGGTGATAACCGGGTTTGCTGAAACAGGAGAAGCACTGGTGTCTTCTGTTGATAAAGTCATTTTTGTTGGATCGCCTNGGGTTGGTAAGATGATAATGAGAAATGCTGCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCTCAAATTGCAGTTAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCCGGGGCTGAACGATTTTATGTCCACAGGAACATTTATTCATCTTTTGTCAGTAAAGTTACCCAAATCATAAAATCTGTTACAGCTGGCCCACCACTTGCTGGGAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTTGAAGTCCTTGTAAATGATGCTTTGGACAAAGGAGCTGAAATTGTTGCACGTGGAAGTTTTGGGCATATAGGTGAAGATGCTGTTGATCAGTATTTTCCCCCAACTGTGATTGTGAACGTGAATCACTCAATGAGATTGATGCAAGANGAGGCATTTGGACCAATTATGCCAATAATGAAATTTAGCTCTGATGAAGAGGTTATCAAGCTTGCCAATGACTCAAAGTATGGGCTCGGCTGTGCTGTTTTCTCAGGCAGTCAAAGCCGTGCCAGAGAGATAGCTTCCCACATACGTTGTGGGGTAGCTGCAGTTAATGATTTTGCNGCAACATACATGTGTCAGTATCCTGTGGCAGAAAATGGATTTGAATTTCAGGAGTCACTCGTTGAAGCACTATATGGGCTTAGCATATGGGANCGTTTGCAAGCAATTGTAAACGTTTTGAAGATGCTTACTGAGCAGAACTCTACCAGTAGCAATAAGGAGAAATGACTAATCATGTCCGGGCGGGTAACATGCCAAATGGTAAGCTAATAGTCATATTCGCAATACTGGGGGCCTTGGGTTTGTTATGTCCAACTACAATTTGTAGTAGCCATTTTATATATCCTGTCATTTTTGCTGTGCTTATTCGACGATATATCAGCGAGCAAGAAAACTTTCAAGATCAATATTATCATGGAGTATTTTTAAAAGAATAAATAAATATAATCTTTTCGATGTTAATACTAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00161	268747	274568	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0008152 metabolic process

GO:0055114 oxidation-reduction process

molecular_function

GO:0016491 oxidoreductase activity

GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000161s00011287.1	PF00171.17	Aldedh	62	496	7.10E-113

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.308
SRR1783600	control	13.259
SRR1783602	moderate drought stress	15.694
SRR1811619	moderate drought stress	15.428

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.588
DRR006520	Root Summer glycyrrhizin high producing strain	10.187
DRR006521	Root Winter glycyrrhizin high producing strain	19.446
DRR006522	Root Winter glycyrrhizin high producing strain	19.060
DRR006523	Root Summer glycyrrhizin low producing strain	8.014
DRR006524	Root Summer glycyrrhizin low producing strain	8.564
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.982
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.048

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.689
SRR2868004	Drought Stress (root)	20.895
SRR2967015	Control (root)	19.045

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.382
SRR9715740	Leaf	13.754
SRR9715741	Leaf	9.944
SRR9715739	Root	2.533
SRR9715742	Root	7.249
SRR9715743	Root	5.946

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	19.070
SRR8749028	MeJA induced 9h	44.958
SRR8749029	MeJA induced 9h	26.671
SRR8749030	Uninduced	8.255
SRR8749031	Uninduced	6.467
SRR8749032	Uninduced	9.768

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.729
SRR8400027	Control - Root	18.378