Gene detail information of Glyur000161s00011275 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004487766.1 | 3.94E-32 | PREDICTED: GATA zinc finger domain-containing protein 4-like [Cicer arietinum] |
| trEMBL | tr|C6SWU9|C6SWU9_SOYBN | 6.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00161 | 231336 | 231641 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.432 |
| SRR1783600 | control | 12.201 |
| SRR1783602 | moderate drought stress | 42.030 |
| SRR1811619 | moderate drought stress | 41.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.904 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.278 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 74.768 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 73.229 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 139.659 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 140.103 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 781.933 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 776.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.518 |
| SRR2868004 | Drought Stress (root) | 50.777 |
| SRR2967015 | Control (root) | 82.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 734.914 |
| SRR9715740 | Leaf | 458.199 |
| SRR9715741 | Leaf | 766.618 |
| SRR9715739 | Root | 61.808 |
| SRR9715742 | Root | 200.350 |
| SRR9715743 | Root | 184.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.216 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.135 |
| SRR8400027 | Control - Root | 27.735 |