Gene detail information of Glyur000161s00011274 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004487766.1 | 2.37E-25 | PREDICTED: GATA zinc finger domain-containing protein 4-like [Cicer arietinum] |
| trEMBL | tr|Q9LRI4|Q9LRI4_PEA | 6.00E-21 | PsAD2 {ECO:0000313|EMBL:BAA90878.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00161 | 226551 | 228698 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.731 |
| SRR1783600 | control | 20.760 |
| SRR1783602 | moderate drought stress | 105.209 |
| SRR1811619 | moderate drought stress | 112.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 189.659 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 195.355 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.674 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.022 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 284.190 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 292.285 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 187.531 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 189.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.296 |
| SRR2868004 | Drought Stress (root) | 36.618 |
| SRR2967015 | Control (root) | 66.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 78.604 |
| SRR9715740 | Leaf | 66.894 |
| SRR9715741 | Leaf | 71.297 |
| SRR9715739 | Root | 22.507 |
| SRR9715742 | Root | 59.293 |
| SRR9715743 | Root | 41.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.114 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.335 |
| SRR8400027 | Control - Root | 39.719 |