Gene detail information of Glyur000161s00011273 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004487766.1 | 4.49E-27 | PREDICTED: GATA zinc finger domain-containing protein 4-like [Cicer arietinum] |
| trEMBL | tr|C6SWU9|C6SWU9_SOYBN | 1.00E-20 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00161 | 221183 | 221829 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.812 |
| SRR1783600 | control | 4.095 |
| SRR1783602 | moderate drought stress | 21.098 |
| SRR1811619 | moderate drought stress | 19.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 73.330 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 71.465 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.052 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.927 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 90.307 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 88.869 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.801 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.083 |
| SRR2868004 | Drought Stress (root) | 16.841 |
| SRR2967015 | Control (root) | 33.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.848 |
| SRR9715740 | Leaf | 5.649 |
| SRR9715741 | Leaf | 3.039 |
| SRR9715739 | Root | 0.887 |
| SRR9715742 | Root | 8.954 |
| SRR9715743 | Root | 4.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.044 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.054 |
| SRR8749032 | Uninduced | 0.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.867 |
| SRR8400027 | Control - Root | 5.626 |