Gene detail information of Glyur000161s00011271 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004487766.1 | 4.65E-34 | PREDICTED: GATA zinc finger domain-containing protein 4-like [Cicer arietinum] |
| trEMBL | tr|Q9LRI4|Q9LRI4_PEA | 2.00E-26 | PsAD2 {ECO:0000313|EMBL:BAA90878.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00161 | 219925 | 220332 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.169 |
| SRR1783600 | control | 6.092 |
| SRR1783602 | moderate drought stress | 32.808 |
| SRR1811619 | moderate drought stress | 36.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 96.431 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 93.234 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.126 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.932 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 104.783 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 107.856 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.245 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.234 |
| SRR2868004 | Drought Stress (root) | 19.419 |
| SRR2967015 | Control (root) | 47.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.700 |
| SRR9715740 | Leaf | 17.747 |
| SRR9715741 | Leaf | 11.496 |
| SRR9715739 | Root | 2.287 |
| SRR9715742 | Root | 8.957 |
| SRR9715743 | Root | 14.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.076 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.089 |
| SRR8749032 | Uninduced | 0.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.876 |
| SRR8400027 | Control - Root | 11.662 |