Gene detail information of Glyur000161s00011270 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004487769.1 | 5.17E-128 | PREDICTED: uncharacterized protein LOC101488230 [Cicer arietinum] |
| trEMBL | tr|I1L0S0|I1L0S0_SOYBN | 7.00E-127 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G04180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00161 | 217721 | 218903 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.918 |
| SRR1783600 | control | 1.938 |
| SRR1783602 | moderate drought stress | 2.562 |
| SRR1811619 | moderate drought stress | 2.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.741 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.791 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.509 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.027 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.255 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.450 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.167 |
| SRR2868004 | Drought Stress (root) | 5.117 |
| SRR2967015 | Control (root) | 4.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.566 |
| SRR9715740 | Leaf | 15.025 |
| SRR9715741 | Leaf | 9.351 |
| SRR9715739 | Root | 2.985 |
| SRR9715742 | Root | 5.277 |
| SRR9715743 | Root | 4.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.307 |
| SRR8749028 | MeJA induced 9h | 0.814 |
| SRR8749029 | MeJA induced 9h | 0.098 |
| SRR8749030 | Uninduced | 0.872 |
| SRR8749031 | Uninduced | 0.260 |
| SRR8749032 | Uninduced | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.123 |
| SRR8400027 | Control - Root | 3.209 |