Gene detail information of Glyur000161s00011251 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49350.2 | 2.00E-30 | Glycine-rich protein family |
| NR | XP_004487793.1 | 8.17E-75 | PREDICTED: hybrid signal transduction histidine kinase M-like [Cicer arietinum] |
| trEMBL | tr|I1L0U0|I1L0U0_SOYBN | 2.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G04360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00161 | 71398 | 72927 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.869 |
| SRR1783600 | control | 45.857 |
| SRR1783602 | moderate drought stress | 45.058 |
| SRR1811619 | moderate drought stress | 44.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.109 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.148 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.594 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 130.934 |
| SRR2868004 | Drought Stress (root) | 63.836 |
| SRR2967015 | Control (root) | 52.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.143 |
| SRR9715740 | Leaf | 0.082 |
| SRR9715741 | Leaf | 0.078 |
| SRR9715739 | Root | 53.063 |
| SRR9715742 | Root | 14.785 |
| SRR9715743 | Root | 21.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.088 |
| SRR8749031 | Uninduced | 0.253 |
| SRR8749032 | Uninduced | 0.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 234.465 |
| SRR8400027 | Control - Root | 254.661 |