Gene detail information of Glyur000161s00011245 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58650.1 | 6.00E-49 | |
| NR | XP_006597713.1 | 0 | PREDICTED: uncharacterized protein LOC102669513 [Glycine max] |
| trEMBL | tr|K7MBC0|K7MBC0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15410.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00161 | 36412 | 41740 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000161s00011245.1 | PF14383.1 | VARLMGL | 93 | 124 | 1.10E-14 |
| Glyur000161s00011245.1 | PF14309.1 | DUF4378 | 787 | 937 | 1.80E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.916 |
| SRR1783600 | control | 2.908 |
| SRR1783602 | moderate drought stress | 1.062 |
| SRR1811619 | moderate drought stress | 1.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.860 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.052 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.071 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.451 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.366 |
| SRR2868004 | Drought Stress (root) | 5.012 |
| SRR2967015 | Control (root) | 6.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.317 |
| SRR9715740 | Leaf | 0.264 |
| SRR9715741 | Leaf | 0.771 |
| SRR9715739 | Root | 0.402 |
| SRR9715742 | Root | 0.911 |
| SRR9715743 | Root | 1.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.815 |
| SRR8749028 | MeJA induced 9h | 8.473 |
| SRR8749029 | MeJA induced 9h | 4.223 |
| SRR8749030 | Uninduced | 0.062 |
| SRR8749031 | Uninduced | 0.074 |
| SRR8749032 | Uninduced | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.692 |
| SRR8400027 | Control - Root | 5.700 |