Gene detail information of Glyur000159s00010255 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17910.2 | 3.00E-61 | |
| NR | XP_003624789.1 | 0 | hypothetical protein MTR_7g087490 [Medicago truncatula] |
| trEMBL | tr|G7L2Q0|G7L2Q0_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:AES81007.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00159 | 115874 | 121262 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.722 |
| SRR1783600 | control | 19.840 |
| SRR1783602 | moderate drought stress | 21.094 |
| SRR1811619 | moderate drought stress | 20.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.850 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.964 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.662 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.543 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.111 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.997 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.113 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.392 |
| SRR2868004 | Drought Stress (root) | 29.016 |
| SRR2967015 | Control (root) | 28.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.413 |
| SRR9715740 | Leaf | 6.837 |
| SRR9715741 | Leaf | 6.061 |
| SRR9715739 | Root | 1.910 |
| SRR9715742 | Root | 13.347 |
| SRR9715743 | Root | 12.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.102 |
| SRR8749028 | MeJA induced 9h | 5.910 |
| SRR8749029 | MeJA induced 9h | 4.744 |
| SRR8749030 | Uninduced | 2.020 |
| SRR8749031 | Uninduced | 3.408 |
| SRR8749032 | Uninduced | 1.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.309 |
| SRR8400027 | Control - Root | 25.641 |