Gene detail information of Glyur000158s00011369 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52420.1 | 9.00E-06 | outer envelope membrane protein 7 |
| NR | XP_004493657.1 | 1.35E-20 | PREDICTED: uncharacterized protein LOC101501463 [Cicer arietinum] |
| Swissprot | tr|P19407|OEC6_SPIOL | 7.00E-07 | 6.7 kDa chloroplast outer envelope membrane protein |
| trEMBL | tr|I3SV27|I3SV27_MEDTR | 5.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:AFK44119.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00158 | 221875 | 222081 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.768 |
| SRR1783600 | control | 30.394 |
| SRR1783602 | moderate drought stress | 23.308 |
| SRR1811619 | moderate drought stress | 24.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.424 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.482 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 108.595 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 101.582 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.192 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.264 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 997.330 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1001.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.001 |
| SRR2868004 | Drought Stress (root) | 57.818 |
| SRR2967015 | Control (root) | 62.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 515.331 |
| SRR9715740 | Leaf | 481.165 |
| SRR9715741 | Leaf | 324.966 |
| SRR9715739 | Root | 125.963 |
| SRR9715742 | Root | 82.680 |
| SRR9715743 | Root | 97.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.808 |
| SRR8749028 | MeJA induced 9h | 12.968 |
| SRR8749029 | MeJA induced 9h | 15.814 |
| SRR8749030 | Uninduced | 13.176 |
| SRR8749031 | Uninduced | 10.546 |
| SRR8749032 | Uninduced | 32.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.252 |
| SRR8400027 | Control - Root | 57.515 |