Gene detail information of Glyur000158s00011365 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70280.2 | 4.00E-14 | NHL domain-containing protein |
| NR | XP_006573048.1 | 3.41E-25 | PREDICTED: uncharacterized protein LOC100799483 [Glycine max] |
| trEMBL | tr|I1J5A9|I1J5A9_SOYBN | 1.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G03880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00158 | 187530 | 188525 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.818 |
| SRR1783600 | control | 3.475 |
| SRR1783602 | moderate drought stress | 4.218 |
| SRR1811619 | moderate drought stress | 3.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.809 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.954 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.170 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.884 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.707 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.711 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.074 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.054 |
| SRR2868004 | Drought Stress (root) | 11.909 |
| SRR2967015 | Control (root) | 11.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.746 |
| SRR9715740 | Leaf | 0.916 |
| SRR9715741 | Leaf | 5.029 |
| SRR9715739 | Root | 1.292 |
| SRR9715742 | Root | 9.987 |
| SRR9715743 | Root | 6.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.956 |
| SRR8749028 | MeJA induced 9h | 29.464 |
| SRR8749029 | MeJA induced 9h | 9.969 |
| SRR8749030 | Uninduced | 6.278 |
| SRR8749031 | Uninduced | 18.621 |
| SRR8749032 | Uninduced | 10.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.136 |
| SRR8400027 | Control - Root | 14.377 |