Gene detail information of Glyur000158s00011363 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G63095.1 | 1.00E-05 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | XP_006604424.1 | 1.61E-58 | PREDICTED: uncharacterized protein LOC102669806 [Glycine max] |
| trEMBL | tr|K7MYJ6|K7MYJ6_SOYBN | 6.00E-59 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G33670.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00158 | 180311 | 180787 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.051 |
| SRR1783600 | control | 7.451 |
| SRR1783602 | moderate drought stress | 6.280 |
| SRR1811619 | moderate drought stress | 6.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.682 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.882 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.720 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.693 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.583 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.011 |
| SRR2868004 | Drought Stress (root) | 1.514 |
| SRR2967015 | Control (root) | 1.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.005 |
| SRR9715739 | Root | 1.897 |
| SRR9715742 | Root | 1.423 |
| SRR9715743 | Root | 2.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.290 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.877 |
| SRR8400027 | Control - Root | 4.418 |