Gene detail information of Glyur000158s00011361 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03270.1 | 1.00E-163 | CBS domain-containing protein with a domain of unknown function (DUF21) |
| NR | XP_003553452.2 | 0 | PREDICTED: DUF21 domain-containing protein At4g14240-like isoform X1 [Glycine max] |
| COG | YP_007984945.1 | 1.00E-26 | membrane protein of unknown function [Candidatus Saccharimonas aalborgensis] |
| Swissprot | tr|Q9ZVS8|Y1327_ARATH | 0 | Putative DUF21 domain-containing protein At1g03270 |
| trEMBL | tr|I1N9F6|I1N9F6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G33660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00158 | 172989 | 178789 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000158s00011361.1 | PF01595.15 | DUF21 | 45 | 207 | 2.10E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.795 |
| SRR1783600 | control | 28.808 |
| SRR1783602 | moderate drought stress | 38.393 |
| SRR1811619 | moderate drought stress | 38.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.599 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.462 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.042 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.851 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.237 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.250 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.804 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.022 |
| SRR2868004 | Drought Stress (root) | 60.972 |
| SRR2967015 | Control (root) | 54.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.324 |
| SRR9715740 | Leaf | 16.013 |
| SRR9715741 | Leaf | 16.276 |
| SRR9715739 | Root | 41.764 |
| SRR9715742 | Root | 38.989 |
| SRR9715743 | Root | 37.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.226 |
| SRR8749028 | MeJA induced 9h | 13.770 |
| SRR8749029 | MeJA induced 9h | 8.772 |
| SRR8749030 | Uninduced | 21.569 |
| SRR8749031 | Uninduced | 9.121 |
| SRR8749032 | Uninduced | 10.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.302 |
| SRR8400027 | Control - Root | 46.663 |