Gene detail information of Glyur000158s00011354


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03980.12.00E-92NAD(P)-binding Rossmann-fold superfamily protein
NRKEH23726.11.83E-151enoyl-(acyl carrier) reductase [Medicago truncatula]
COGYP_004752866.15.00E-70short-chain type dehydrogenase/reductase [Collimonas fungivorans Ter331]
Swissprottr|Q08632|SDR1_PICAB2.00E-105Short-chain type dehydrogenase/reductase
trEMBLtr|A0A072U2V3|A0A072U2V3_MEDTR7.00E-152Enoyl-(Acyl carrier) reductase {ECO:0000313|EMBL:KEH23726.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00158119679120464-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00059fabGEC:1.1.1.100Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061
Biosynthesis of unsaturated fatty acidsmap01040
Biotin metabolismmap00780


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016491  oxidoreductase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000158s00011354.1PF13561.1adh_short_C2202601.60E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.514
SRR1783600control25.688
SRR1783602moderate drought stress24.337
SRR1811619moderate drought stress24.888

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.078
DRR006520Root Summer glycyrrhizin high producing strain24.613
DRR006521Root Winter glycyrrhizin high producing strain16.937
DRR006522Root Winter glycyrrhizin high producing strain15.525
DRR006523Root Summer glycyrrhizin low producing strain30.257
DRR006524Root Summer glycyrrhizin low producing strain29.463
DRR006525Leaf Summer glycyrrhizin high producing strain216.380
DRR006526Leaf Summer glycyrrhizin high producing strain213.586

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)31.513
SRR2868004Drought Stress (root)101.766
SRR2967015Control (root)46.640

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf258.061
SRR9715740Leaf320.175
SRR9715741Leaf276.759
SRR9715739Root81.981
SRR9715742Root48.599
SRR9715743Root57.270

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h41.837
SRR8749028MeJA induced 9h52.205
SRR8749029MeJA induced 9h53.256
SRR8749030Uninduced19.755
SRR8749031Uninduced30.210
SRR8749032Uninduced27.277

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root58.189
SRR8400027Control - Root47.466

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved