Gene detail information of Glyur000158s00011350 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02920.2 | 4.00E-61 | |
| NR | XP_004493640.1 | 0 | PREDICTED: uncharacterized protein LOC101496404 isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072U3I2|A0A072U3I2_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH23723.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00158 | 106189 | 109933 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 81.582 |
| SRR1783600 | control | 81.950 |
| SRR1783602 | moderate drought stress | 95.326 |
| SRR1811619 | moderate drought stress | 94.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 160.609 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 159.206 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 65.278 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 63.578 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 103.697 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 104.725 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 83.871 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 82.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.901 |
| SRR2868004 | Drought Stress (root) | 57.200 |
| SRR2967015 | Control (root) | 46.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 102.268 |
| SRR9715740 | Leaf | 204.874 |
| SRR9715741 | Leaf | 126.990 |
| SRR9715739 | Root | 79.678 |
| SRR9715742 | Root | 85.168 |
| SRR9715743 | Root | 86.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 33.206 |
| SRR8749028 | MeJA induced 9h | 28.932 |
| SRR8749029 | MeJA induced 9h | 24.135 |
| SRR8749030 | Uninduced | 15.185 |
| SRR8749031 | Uninduced | 8.581 |
| SRR8749032 | Uninduced | 19.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 103.653 |
| SRR8400027 | Control - Root | 107.957 |