Gene detail information of Glyur000158s00011344 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03350.1 | 1.00E-69 | BSD domain-containing protein |
| NR | XP_004493637.1 | 9.50E-157 | PREDICTED: uncharacterized protein LOC101495422 [Cicer arietinum] |
| trEMBL | tr|V7CYL5|V7CYL5_PHAVU | 1.00E-151 | Uncharacterized protein {ECO:0000313|EMBL:ESW34380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00158 | 79337 | 80632 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000158s00011344.1 | PF03909.12 | BSD | 163 | 221 | 7.20E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.036 |
| SRR1783600 | control | 2.977 |
| SRR1783602 | moderate drought stress | 2.846 |
| SRR1811619 | moderate drought stress | 2.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.955 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.047 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.569 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.397 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.326 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.489 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.281 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.277 |
| SRR2868004 | Drought Stress (root) | 13.477 |
| SRR2967015 | Control (root) | 16.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.723 |
| SRR9715740 | Leaf | 7.258 |
| SRR9715741 | Leaf | 6.334 |
| SRR9715739 | Root | 0.646 |
| SRR9715742 | Root | 3.561 |
| SRR9715743 | Root | 3.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.457 |
| SRR8749028 | MeJA induced 9h | 3.393 |
| SRR8749029 | MeJA induced 9h | 2.324 |
| SRR8749030 | Uninduced | 2.612 |
| SRR8749031 | Uninduced | 6.021 |
| SRR8749032 | Uninduced | 2.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.547 |
| SRR8400027 | Control - Root | 8.358 |