Gene detail information of Glyur000158s00011341 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G48070.2 | 7.00E-68 | resistance to phytophthora 1 |
| NR | XP_006576881.1 | 3.05E-137 | PREDICTED: uncharacterized protein LOC100795293 [Glycine max] |
| trEMBL | tr|I1JNQ5|I1JNQ5_SOYBN | 1.00E-137 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G30610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00158 | 71118 | 73132 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.849 |
| SRR1783600 | control | 2.848 |
| SRR1783602 | moderate drought stress | 5.022 |
| SRR1811619 | moderate drought stress | 4.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.440 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.409 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.816 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.591 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.491 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.495 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 87.743 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 88.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.187 |
| SRR2868004 | Drought Stress (root) | 1.930 |
| SRR2967015 | Control (root) | 1.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.359 |
| SRR9715740 | Leaf | 76.277 |
| SRR9715741 | Leaf | 47.808 |
| SRR9715739 | Root | 0.142 |
| SRR9715742 | Root | 0.734 |
| SRR9715743 | Root | 0.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.562 |
| SRR8749028 | MeJA induced 9h | 1.537 |
| SRR8749029 | MeJA induced 9h | 0.721 |
| SRR8749030 | Uninduced | 0.550 |
| SRR8749031 | Uninduced | 0.055 |
| SRR8749032 | Uninduced | 0.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.779 |
| SRR8400027 | Control - Root | 2.217 |