Gene detail information of Glyur000157s00015853 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003613530.1 | 2.47E-23 | Tir-nbs-lrr resistance protein [Medicago truncatula] |
| trEMBL | tr|G7K8D6|G7K8D6_MEDTR | 9.00E-24 | Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:AES96488.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00157 | 288753 | 290662 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.077 |
| SRR1783600 | control | 0.032 |
| SRR1783602 | moderate drought stress | 0.101 |
| SRR1811619 | moderate drought stress | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.187 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.768 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.301 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.397 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.248 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.990 |
| SRR2868004 | Drought Stress (root) | 41.170 |
| SRR2967015 | Control (root) | 47.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.214 |
| SRR9715739 | Root | 0.038 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.535 |
| SRR8749028 | MeJA induced 9h | 0.134 |
| SRR8749029 | MeJA induced 9h | 1.024 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.227 |
| SRR8749032 | Uninduced | 0.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.548 |
| SRR8400027 | Control - Root | 3.157 |