Gene detail

Gene detail information of Glyur000157s00015848.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G69910.1	6.00E-123	Protein kinase superfamily protein
NR	XP_003613504.1	0	Wall-associated receptor kinase-like protein [Medicago truncatula]
COG	YP_008151634.1	2.00E-23	hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprot	tr\|P0C5E2\|Y1839_ARATH	3.00E-88	Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBL	tr\|G7K8B0\|G7K8B0_MEDTR	0	Tyrosine kinase family protein {ECO:0000313\|EMBL:AES96462.1}

Sequence

Transcript Sequence

>Glyur000157s00015848.1
ATGCTCTTCCTCCACAACCATCGCTCAGCAAGCCTCCTCCCTCCGGTTTTCACCTACGAGGAACTCGACACCTCCACCAACCACTTCGATCCAAAGCGGAAAATCGGCGACGGCGGGTTCGGCTCTGTTTACCTCGGCCACCTCCGCGACGGGAGGATCGCCGCCGTGAAGCACCTCCACCGGCAGCACAGTTCCGCATCGGCGTTCTCAACAAAATCCTTCTGCAACGAGATTCTCATCCTCTCCTCAATCGACCACCCAAACCTCGTGAAGCTCCACGGTTACTGCAGCGACCCGAGGGGTCTTCTCCTCGTCTACGATTACATCCCCAACGGAACCCTAGCNGATCACCTCCACGGTAACGGTAACGGAAAACGGAAAGGTTTGCTGACGTGGCCGACGAGGCTCGAAATTGCGGTTCAAACGGCGTTGGCAATGGAGTACCTTCACTTTTCCGTTGCGCCGCCGATTGTTCACAGGGATATAACTTCCTCCAACATCTTCGTGGAGAGGGATATGAGGATTAAGGTTGGGGATTTCGGGCTCTCGAGGCTGTTGGTGTTGCAGGACAACACGAACACGACGTCGTCTTCGATTTCGAACGGGTACGTTTGGACCGGGCCACAGGGTACACCCGGTTATTTGGACCCGGATTACCACCGGTCGTTCCGGTTAACCGAGAAGAGTGACGTGTACAGCTTCGGTGTGGTTCTTCTGGAACTAATCTCGGGTCTTAGGGCGGTTGACCAGAACCGTGACAAGCGTGAGATGGCGCTCGCCGACATGGTTGTTTCAAGGATCCACACGGGTCAGCTTCACCAGGTTCTCGACCCGGTTCTTAAGCTCGACCACGATGCCGCCGCACTTGACGCTGTCGCCGCCGTCGCAGAGCTCGCGTTCCGGTGCGTCGCGCCGGAGAAGGACGACCGACCCGATTCGAAGGAAATTGTCGAGGAGCTTAAGCGGGTTCGGAGCCGGGTCAACGAGGNGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00157	255640	256632	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0009966 regulation of signal transduction

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000157s00015848.1	PF07714.12	Pkinase_Tyr	32	320	1.70E-43

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.182
SRR1783600	control	8.461
SRR1783602	moderate drought stress	8.906
SRR1811619	moderate drought stress	8.687

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.175
DRR006520	Root Summer glycyrrhizin high producing strain	4.020
DRR006521	Root Winter glycyrrhizin high producing strain	1.010
DRR006522	Root Winter glycyrrhizin high producing strain	0.986
DRR006523	Root Summer glycyrrhizin low producing strain	3.977
DRR006524	Root Summer glycyrrhizin low producing strain	3.462
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.415
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.762

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.467
SRR2868004	Drought Stress (root)	4.343
SRR2967015	Control (root)	3.782

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.800
SRR9715740	Leaf	1.974
SRR9715741	Leaf	2.492
SRR9715739	Root	3.893
SRR9715742	Root	2.598
SRR9715743	Root	3.298

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.093
SRR8749028	MeJA induced 9h	0.234
SRR8749029	MeJA induced 9h	1.053
SRR8749030	Uninduced	0.259
SRR8749031	Uninduced	0.077
SRR8749032	Uninduced	0.304

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.823
SRR8400027	Control - Root	1.721