Gene detail information of Glyur000157s00015838 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G59650.1 | 3.00E-139 | Protein of unknown function (DUF1336) |
| NR | XP_003517757.1 | 0 | PREDICTED: uncharacterized protein LOC100787325 isoform X1 [Glycine max] |
| trEMBL | tr|I1J5H8|I1J5H8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G04630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00157 | 202508 | 207289 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000157s00015838.1 | PF07059.7 | DUF1336 | 273 | 441 | 2.30E-41 |
| Glyur000157s00015838.1 | PF07059.7 | DUF1336 | 442 | 462 | 0.00012 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.200 |
| SRR1783600 | control | 3.128 |
| SRR1783602 | moderate drought stress | 4.460 |
| SRR1811619 | moderate drought stress | 4.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.281 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.092 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.289 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.179 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.757 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.615 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.780 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.472 |
| SRR2868004 | Drought Stress (root) | 13.530 |
| SRR2967015 | Control (root) | 11.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.626 |
| SRR9715740 | Leaf | 8.277 |
| SRR9715741 | Leaf | 20.156 |
| SRR9715739 | Root | 4.147 |
| SRR9715742 | Root | 8.719 |
| SRR9715743 | Root | 9.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.093 |
| SRR8749028 | MeJA induced 9h | 11.716 |
| SRR8749029 | MeJA induced 9h | 15.958 |
| SRR8749030 | Uninduced | 20.358 |
| SRR8749031 | Uninduced | 23.501 |
| SRR8749032 | Uninduced | 8.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.877 |
| SRR8400027 | Control - Root | 11.129 |