Gene detail information of Glyur000157s00015835 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45980.1 | 6.00E-16 | |
| NR | XP_004492753.1 | 3.97E-110 | PREDICTED: uncharacterized protein LOC101509262 isoform X4 [Cicer arietinum] |
| trEMBL | tr|C6T9D2|C6T9D2_SOYBN | 2.00E-102 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU18434.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00157 | 150183 | 152659 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.095 |
| SRR1783600 | control | 18.312 |
| SRR1783602 | moderate drought stress | 18.300 |
| SRR1811619 | moderate drought stress | 19.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.257 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.717 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 83.296 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 84.862 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.044 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.378 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.859 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.526 |
| SRR2868004 | Drought Stress (root) | 42.047 |
| SRR2967015 | Control (root) | 39.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.583 |
| SRR9715740 | Leaf | 12.799 |
| SRR9715741 | Leaf | 29.435 |
| SRR9715739 | Root | 7.890 |
| SRR9715742 | Root | 30.383 |
| SRR9715743 | Root | 24.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.896 |
| SRR8749028 | MeJA induced 9h | 47.742 |
| SRR8749029 | MeJA induced 9h | 29.962 |
| SRR8749030 | Uninduced | 29.336 |
| SRR8749031 | Uninduced | 45.133 |
| SRR8749032 | Uninduced | 26.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.627 |
| SRR8400027 | Control - Root | 33.894 |