Gene detail information of Glyur000157s00015832 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69935.1 | 7.00E-13 | short hypocotyl in white light1 |
| NR | XP_004489950.1 | 1.16E-93 | PREDICTED: uncharacterized protein LOC101513328 [Cicer arietinum] |
| trEMBL | tr|G7K712|G7K712_MEDTR | 7.00E-89 | Uncharacterized protein {ECO:0000313|EMBL:AFK37394.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00157 | 140856 | 143901 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.191 |
| SRR1783600 | control | 13.529 |
| SRR1783602 | moderate drought stress | 10.458 |
| SRR1811619 | moderate drought stress | 10.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.834 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.010 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.078 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.502 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.739 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.262 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.410 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.725 |
| SRR2868004 | Drought Stress (root) | 17.380 |
| SRR2967015 | Control (root) | 14.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.031 |
| SRR9715740 | Leaf | 33.050 |
| SRR9715741 | Leaf | 21.811 |
| SRR9715739 | Root | 6.897 |
| SRR9715742 | Root | 10.754 |
| SRR9715743 | Root | 8.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.269 |
| SRR8749028 | MeJA induced 9h | 6.142 |
| SRR8749029 | MeJA induced 9h | 9.548 |
| SRR8749030 | Uninduced | 5.880 |
| SRR8749031 | Uninduced | 3.474 |
| SRR8749032 | Uninduced | 1.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.268 |
| SRR8400027 | Control - Root | 17.652 |