Gene detail

Gene detail information of Glyur000157s00015830

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G59820.1	0	aminophospholipid ATPase 3
NR	XP_003553212.1	0	PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max]
COG	YP_003827554.1	1.00E-18	ATPase P [Acetohalobium arabaticum DSM 5501]
Swissprot	tr\|Q9XIE6\|ALA3_ARATH	0	Phospholipid-transporting ATPase 3
trEMBL	tr\|I1KXN1\|I1KXN1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G40530.1}

Sequence

Transcript Sequence

>Glyur000157s00015830.1
CATGTCCGTCCGGGAGCGCGAAAAAGGAAAGCGAGAGAGAGAGAGAGAGGGGGAATAATAAGCACGAGCACGAACGTGGGTTCCGAAGAGAAAAGAAAACCNAAAGGGCACAAGTTGGTTTAAAATTGTGAATCTCTGGTTTCACTTTCAGTTTCAGCGATTCATATTTGCAACGGAACAGAACAAAGGAAAATGATATCTAGTGGAAGAAGGTGAAACACATTGGAGGATGAGAATGAGATAGGTATTATCATGAACCGTTATCTTCATCTTCATCTTCACCTTCTTCTTTCTCTTCTCTGAGATCGTGTTCCAGAATGAACGAGCGCGTGCCTTCGTCTCGAACGGTTCGACTCGGCCGAGTCGAGCCCCAGGCNCCTGGTCACCGCACCATCTTCTGCAACGATCGACAAGCCAATCTCCCCGTCCGATTCAAGGGGAATTCAGTATCGACTACAAAGTACAACTTTTTCACTTTNTTGCCGAAAGGATTGTTTGAGCAGTTCAGGCGGGTTGCTAATCTCTATTTTCTTACAATCTCAATTTTTTCTACCACACCAATCAGCCCTGTGTCACCAATAACTAATGTGCTTCCTCTATCTCTGGTGCTTCTCCTTTCTCTTATTAAAGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGGCCATAAACAATAATATGATAGATGTTTTGCAAGATCAAGAGTGGGTGTCTATTCCCTGGAAAAAGTTGCAAGTTGGCGACATTGTCAAGGTTAAGCAGGATGGAATCTTTCCTGCAGATTTGCTTTTCCTGGCTAGTACAAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGACGGGGAAACCAACTTGAAAATTAGGAAAGGATTGGAAAGGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAATTCGGTGTGAACAACCAAACAATTCATTGTATACCTTCACCGGAAATCTTATAATTCAAAATCAAACCCTTCCTGTCAGTCCAAATCAACTTTTGTTGCGAGGATGCAGCCTCAGGAATACAGAATATATTGTTGGGGTTGTTATTTTCACAGGACATGAAACAAAGGTGATGATGAATGCTATGATTGTTCCTTCCAAAAGAAGTACACTAGAGAGGAAGCTTGACAAGCTCATACTCACTCTATTTGCGACTCTCTTTGTAATGTGCTTTATTGGAGCTGTAGGCAGTGCTATCTTTGTAAACAAGAAGTATTTCTATTTACATCTTGAATCATCAGAGGAGGGCTCAGCACAGTTCAATCCAAGTAACAGATTTTTGGTTTTTCTTCTGACTATGTTTACCCTCATCACTTTATACTCAACAATCATCCCCATTTCACTCTATGTGTCGATAGAGATGATCAAATTTATTCAGTCCACTCAATTTATCAACAAGGACTTGCACATGTACCATTATGAAACCAATACCCCAGCATTGGCTAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTTGAATACATCTTCTCAGACAAAACTGGGACTCTGACAAGAAACTTAATGGAGTTCTTCAAGTGCTCAATTGGAGGAGAGGTCTATGGAAACGGCGTGACTGAAATTGAGAAGGGAATAGCAGAGCGTAGCGGCATAAAACTTGAGGAAAATATCTCATCCAATGCAGTGCGAGAGAGGGGTTTTAATTTNGATGATGCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTGCTTCCTGAGGGTGATGAGTTCCCTGATAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAGAACTTTGGTTTTTTCTTTTACAGGCGCACACCTACAACAATATATATTCGCGAGTCTGATGTTGAGAAGGTGGGCAAAATTCAAGATGTGTCGTATGAGATTTTGAATGTGCTTGAGTTTAANAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCGGATGGGAGGCTTGTATTATACTGTAAGGGTGCTGATAATGTAATCTTTGAGAGATTAGCTGATGGCTATAATGATATTAAAAAAGTGACTAGGGAGCATTTAGAACAATTTGGATCTTCTGGACTACGCACATTATGCCTGGCCTACAAAGAATTACATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTCATCCAGGCTAAATCTTCTCTACATGATCGGGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAGTGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGATGGAGTACCAGCCTGCATAGATACTCTTCAAAGAGCTGGCATTAAAATTTGGGTGCTTACAGGGGACAAGATTGAAACAGCAATCAATATTGCCTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTCATTATCAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGGGACCAAGTAGAAATTGCACAGTTTATTAAAGAAGAGGTGATGAAAGAGCTGAAGAAGTGCCTTGAGGAAGTACAAAGCTATTTTAGCTCTCTATCTGGAACAAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCTCTGGATCCAACCTTGAGAGTCATGCTGCTGAATTTGAGTTTGAATTGCCATGCTGTTGTTTGCTGCAGAGTTTCTCCTTTACAGAAAGCACAGGTCACAAGTTTGGTCAAGAAAGGTGCACGGAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTATTGGCATAAGTGGGTTGGAGGGAATGCAAGCTGTAATGGCTAGTGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTGCTCCTTGTTCATGGCCGGTGGTCATATTTCCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACGTTCACTCTTACTCAGTTTTGGTTTACCTTTCAAACTGGGTTTTCTGGCCAGAGATTCTATGATGATTGGTTTCAGTCATTGTATAACGTTATCTTCACTGCATTGCCTGTGATCATTGTTGGACTATTTGACAAGGACGTCGGTGCATCTCTATCCAAGAAGTATCCTGAACTATACAAGGAGGGAATAAGAAATGTCTTTTTCAAATGGAGAGTTGTGGCTATATGGGCCTTTTTTTCTGTCTACCAGTCTCTAGTATTCTTCTATTTTGTAAGTTCGACAAGTTTAAGTGCTAAAAATTCGGCAGGCAAGACATTTGGACTCTGGGATGTCAGCACAATGGCCTTCACATGTGTTGTAGTAACTGTCAACTTGCGACTTCTTATGATTTGTAATTCAATCACAAGGTGGCACTATATTAGTGTCGGTGGAAGTATATTAGCATGGTTTTGTTTTGTTTTTATATATTGTGGGATCAGCACTCCTTATGATCGTCAGGAGAATATGTATTTTGTCATGTATGTCTTGATGAGTACAGTGTATTTCTACCTCACACTNATTCTTGTCCCTGTTGCCGCACTTTTTTGTGACTTTGTTTACCAAGGGGTTCAGAGATGGTTCTTCCCCTATGATTATCAGATTATTCAAGAAATGCATAGACATGAAAATGATGACACCAGCAGGGCACAACTGCTAGAGGTAGGGAACCAACTTACTCCAGCTGAGGCAAGGAGCCATTCCATGTCTCAACTCCCACGTGAGATATCAAAGCACACCGGGTTTGCTTTCGATTCACCTGGTTATGAGTCATTTTTTGCTGCACAACTTGGTGTATATGCCCCCCAAAAGGCCTGGGATGTTGCAAGACGAGCTAGTAGCATGAGATCTCGATCTAAGACTGGAAAGAAAAAGTAATTTGGAGTAGGATGATTGNACATTTACTTTATTTTTGGNTTTTCGTTTGANGGCCAGCCCTAGGAGATTTGTAAAATTANCATGTGCCATATTAAATATTGGTCATTGTCATTTAGGTAAATATTGGTAATTTA

Protein Sequence

>Glyur000157s00015830.1
MNERVPSSRTVRLGRVEPQAPGHRTIFCNDRQANLPVRFKGNSVSTTKYNFFTXLPKGLFEQFRRVANLYFLTISIFSTTPISPVSPITNVLPLSLVLLLSLIKEAFEDWKRFQNDMAINNNMIDVLQDQEWVSIPWKKLQVGDIVKVKQDGIFPADLLFLASTNVDGVCYIETANLDGETNLKIRKGLERTWDYLTPEKASEFKGEIRCEQPNNSLYTFTGNLIIQNQTLPVSPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNAMIVPSKRSTLERKLDKLILTLFATLFVMCFIGAVGSAIFVNKKYFYLHLESSEEGSAQFNPSNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLHMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIEKGIAERSGIKLEENISSNAVRERGFNXDDARLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDEFPDKIRYQAASPDEAALVIAAKNFGFFFYRRTPTTIYIRESDVEKVGKIQDVSYEILNVLEFXSTRKRQSVVCRYPDGRLVLYCKGADNVIFERLADGYNDIKKVTREHLEQFGSSGLRTLCLAYKELHPDVYESWNEKFIQAKSSLHDREKKLDEVAELIESDLILIGSTAIEDKLQDGVPACIDTLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREVEDRGDQVEIAQFIKEEVMKELKKCLEEVQSYFSSLSGTKLALVIDGKCLMYALDPTLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGIGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYFRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVGASLSKKYPELYKEGIRNVFFKWRVVAIWAFFSVYQSLVFFYFVSSTSLSAKNSAGKTFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFCFVFIYCGISTPYDRQENMYFVMYVLMSTVYFYLTLILVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHRHENDDTSRAQLLEVGNQLTPAEARSHSMSQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASSMRSRSKTGKKK

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00157	119902	138195	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0015914 phospholipid transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0000166 nucleotide binding

GO:0000287 magnesium ion binding

GO:0004012 phospholipid-translocating ATPase activity

GO:0005524 ATP binding

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000157s00015830.1	PF00122.15	E1-E2_ATPase	96	373	1.50E-19
Glyur000157s00015830.1	PF12710.2	HAD	403	846	6.10E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.655
SRR1783600	control	3.625
SRR1783602	moderate drought stress	2.619
SRR1811619	moderate drought stress	2.519

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.607
DRR006520	Root Summer glycyrrhizin high producing strain	1.588
DRR006521	Root Winter glycyrrhizin high producing strain	1.546
DRR006522	Root Winter glycyrrhizin high producing strain	1.349
DRR006523	Root Summer glycyrrhizin low producing strain	1.444
DRR006524	Root Summer glycyrrhizin low producing strain	1.323
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.851
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.787

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.808
SRR2868004	Drought Stress (root)	1.623
SRR2967015	Control (root)	1.836

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.629
SRR9715740	Leaf	2.775
SRR9715741	Leaf	2.200
SRR9715739	Root	0.461
SRR9715742	Root	1.328
SRR9715743	Root	1.009

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.408
SRR8749028	MeJA induced 9h	2.204
SRR8749029	MeJA induced 9h	1.852
SRR8749030	Uninduced	0.862
SRR8749031	Uninduced	0.910
SRR8749032	Uninduced	0.559

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.309
SRR8400027	Control - Root	1.691