Gene detail information of Glyur000156s00012010 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03020.1 | 7.00E-35 | Thioredoxin superfamily protein |
| NR | XP_006604702.1 | 4.10E-61 | PREDICTED: monothiol glutaredoxin-S6-like [Glycine max] |
| COG | YP_001417976.1 | 1.00E-09 | glutaredoxin 3 [Xanthobacter autotrophicus Py2] |
| Swissprot | tr|Q9SA68|GRXS1_ARATH | 5.00E-44 | Monothiol glutaredoxin-S1 |
| trEMBL | tr|K7MZG9|K7MZG9_SOYBN | 2.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39521.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00156 | 229582 | 229899 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000156s00012010.1 | PF00462.19 | Glutaredoxin | 13 | 75 | 2.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.876 |
| SRR1783600 | control | 2.649 |
| SRR1783602 | moderate drought stress | 37.696 |
| SRR1811619 | moderate drought stress | 34.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.501 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.421 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.051 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.895 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.571 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.499 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.712 |
| SRR2868004 | Drought Stress (root) | 1.353 |
| SRR2967015 | Control (root) | 2.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.580 |
| SRR9715740 | Leaf | 2.207 |
| SRR9715741 | Leaf | 0.511 |
| SRR9715739 | Root | 2.538 |
| SRR9715742 | Root | 2.708 |
| SRR9715743 | Root | 0.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.156 |
| SRR8400027 | Control - Root | 1.189 |