Gene detail information of Glyur000156s00012009 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62930.1 | 4.00E-37 | Thioredoxin superfamily protein |
| NR | XP_003554509.1 | 1.30E-59 | PREDICTED: monothiol glutaredoxin-S6-like [Glycine max] |
| COG | YP_004179299.1 | 1.00E-08 | glutaredoxin [Isosphaera pallida ATCC 43644] |
| Swissprot | tr|Q9LYC8|GRXS6_ARATH | 4.00E-47 | Monothiol glutaredoxin-S6 |
| trEMBL | tr|I1NB22|I1NB22_SOYBN | 5.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00156 | 221618 | 221908 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000156s00012009.1 | PF00462.19 | Glutaredoxin | 7 | 68 | 2.40E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.170 |
| SRR1783600 | control | 13.523 |
| SRR1783602 | moderate drought stress | 67.044 |
| SRR1811619 | moderate drought stress | 67.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 97.076 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 95.865 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 529.186 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 527.744 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.556 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.781 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 45.713 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 44.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.595 |
| SRR2868004 | Drought Stress (root) | 1.311 |
| SRR2967015 | Control (root) | 3.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.801 |
| SRR9715740 | Leaf | 21.139 |
| SRR9715741 | Leaf | 3.923 |
| SRR9715739 | Root | 15.791 |
| SRR9715742 | Root | 5.783 |
| SRR9715743 | Root | 7.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.219 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.134 |
| SRR8400027 | Control - Root | 0.408 |