Gene detail information of Glyur000156s00011996 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03470.2 | 8.00E-30 | Kinase interacting (KIP1-like) family protein |
| NR | XP_003554497.2 | 2.46E-143 | PREDICTED: major antigen-like [Glycine max] |
| trEMBL | tr|K7MZF8|K7MZF8_SOYBN | 9.00E-144 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39385.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00156 | 114843 | 116912 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000156s00011996.1 | PF07765.7 | KIP1 | 35 | 94 | 1.70E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.402 |
| SRR1783600 | control | 2.517 |
| SRR1783602 | moderate drought stress | 1.786 |
| SRR1811619 | moderate drought stress | 1.564 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.091 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.348 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.239 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.234 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.944 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.060 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.130 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.014 |
| SRR2868004 | Drought Stress (root) | 6.644 |
| SRR2967015 | Control (root) | 9.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.783 |
| SRR9715740 | Leaf | 0.618 |
| SRR9715741 | Leaf | 1.566 |
| SRR9715739 | Root | 0.845 |
| SRR9715742 | Root | 2.430 |
| SRR9715743 | Root | 1.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.561 |
| SRR8749028 | MeJA induced 9h | 3.089 |
| SRR8749029 | MeJA induced 9h | 4.807 |
| SRR8749030 | Uninduced | 0.273 |
| SRR8749031 | Uninduced | 0.012 |
| SRR8749032 | Uninduced | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.682 |
| SRR8400027 | Control - Root | 15.031 |