Gene detail information of Glyur000156s00011989 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03130.1 | 8.00E-67 | BRCT domain-containing DNA repair protein |
| NR | XP_006604694.1 | 0 | PREDICTED: uncharacterized protein LOC102659913 isoform X1 [Glycine max] |
| trEMBL | tr|K7MZF3|K7MZF3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39311.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00156 | 71422 | 76001 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.053 |
| SRR1783600 | control | 2.073 |
| SRR1783602 | moderate drought stress | 1.843 |
| SRR1811619 | moderate drought stress | 1.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.951 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.945 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.225 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.291 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.932 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.934 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.189 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.153 |
| SRR2868004 | Drought Stress (root) | 5.291 |
| SRR2967015 | Control (root) | 5.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.319 |
| SRR9715740 | Leaf | 0.167 |
| SRR9715741 | Leaf | 0.177 |
| SRR9715739 | Root | 0.118 |
| SRR9715742 | Root | 0.573 |
| SRR9715743 | Root | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.771 |
| SRR8749028 | MeJA induced 9h | 4.090 |
| SRR8749029 | MeJA induced 9h | 2.744 |
| SRR8749030 | Uninduced | 2.082 |
| SRR8749031 | Uninduced | 3.216 |
| SRR8749032 | Uninduced | 1.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.665 |
| SRR8400027 | Control - Root | 1.596 |