Gene detail information of Glyur000156s00011986 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004494313.1 | 1.47E-35 | PREDICTED: uncharacterized protein LOC101494570 [Cicer arietinum] |
| trEMBL | tr|I1JQF8|I1JQF8_SOYBN | 1.00E-28 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G36640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00156 | 49820 | 51209 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.941 |
| SRR1783600 | control | 3.067 |
| SRR1783602 | moderate drought stress | 3.742 |
| SRR1811619 | moderate drought stress | 3.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.054 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.916 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.701 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.649 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.557 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.584 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.709 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.155 |
| SRR2868004 | Drought Stress (root) | 11.074 |
| SRR2967015 | Control (root) | 8.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.078 |
| SRR9715740 | Leaf | 2.822 |
| SRR9715741 | Leaf | 2.449 |
| SRR9715739 | Root | 8.082 |
| SRR9715742 | Root | 2.613 |
| SRR9715743 | Root | 3.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.049 |
| SRR8749028 | MeJA induced 9h | 3.855 |
| SRR8749029 | MeJA induced 9h | 8.677 |
| SRR8749030 | Uninduced | 1.293 |
| SRR8749031 | Uninduced | 1.072 |
| SRR8749032 | Uninduced | 0.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.817 |
| SRR8400027 | Control - Root | 16.787 |