Gene detail information of Glyur000155s00012821 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18690.1 | 3.00E-24 | MAP kinase substrate 1 |
| NR | XP_004503952.1 | 1.90E-107 | PREDICTED: protein MKS1-like [Cicer arietinum] |
| Swissprot | tr|Q8LGD5|MKS1_ARATH | 3.00E-28 | Protein MKS1 |
| trEMBL | tr|G7LD80|G7LD80_MEDTR | 7.00E-104 | Uncharacterized protein {ECO:0000313|EMBL:AFK43245.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00155 | 234623 | 235264 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000155s00012821.1 | PF05678.9 | VQ | 68 | 95 | 2.90E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.934 |
| SRR1783600 | control | 7.133 |
| SRR1783602 | moderate drought stress | 9.182 |
| SRR1811619 | moderate drought stress | 8.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.033 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.416 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.002 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.356 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.063 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.864 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.710 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.622 |
| SRR2868004 | Drought Stress (root) | 11.514 |
| SRR2967015 | Control (root) | 12.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.623 |
| SRR9715740 | Leaf | 26.585 |
| SRR9715741 | Leaf | 72.375 |
| SRR9715739 | Root | 13.036 |
| SRR9715742 | Root | 8.652 |
| SRR9715743 | Root | 12.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.593 |
| SRR8749028 | MeJA induced 9h | 5.304 |
| SRR8749029 | MeJA induced 9h | 4.820 |
| SRR8749030 | Uninduced | 1.104 |
| SRR8749031 | Uninduced | 0.444 |
| SRR8749032 | Uninduced | 6.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.383 |
| SRR8400027 | Control - Root | 7.809 |