Gene detail information of Glyur000155s00012819 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77145.1 | 2.00E-34 | Protein of unknown function (DUF506) |
| NR | XP_006579404.1 | 5.28E-126 | PREDICTED: uncharacterized protein LOC100782815 isoform X1 [Glycine max] |
| trEMBL | tr|I1K4X6|I1K4X6_SOYBN | 2.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G32360.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00155 | 221683 | 223262 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000155s00012819.1 | PF04720.7 | DUF506 | 10 | 213 | 1.60E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.177 |
| SRR1783600 | control | 9.060 |
| SRR1783602 | moderate drought stress | 24.784 |
| SRR1811619 | moderate drought stress | 24.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 82.535 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 81.594 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 624.712 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 606.397 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 57.093 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 57.592 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.543 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.302 |
| SRR2868004 | Drought Stress (root) | 13.173 |
| SRR2967015 | Control (root) | 15.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.252 |
| SRR9715740 | Leaf | 12.711 |
| SRR9715741 | Leaf | 8.991 |
| SRR9715739 | Root | 8.461 |
| SRR9715742 | Root | 22.061 |
| SRR9715743 | Root | 19.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.780 |
| SRR8749028 | MeJA induced 9h | 99.558 |
| SRR8749029 | MeJA induced 9h | 46.259 |
| SRR8749030 | Uninduced | 19.545 |
| SRR8749031 | Uninduced | 12.472 |
| SRR8749032 | Uninduced | 21.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.803 |
| SRR8400027 | Control - Root | 23.163 |