Gene detail information of Glyur000155s00012810 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48880.1 | 5.00E-156 | TRICHOME BIREFRINGENCE-LIKE 7 |
| NR | XP_003532881.1 | 0 | PREDICTED: protein YLS7-like [Glycine max] |
| Swissprot | tr|F4I037|TBL7_ARATH | 0 | Protein trichome berefringence-like 7 |
| trEMBL | tr|I1KTN7|I1KTN7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G16580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00155 | 170033 | 173296 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000155s00012810.1 | PF14416.1 | PMR5N | 93 | 147 | 4.20E-21 |
| Glyur000155s00012810.1 | PF13839.1 | PC-Esterase | 148 | 422 | 9.00E-61 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.844 |
| SRR1783600 | control | 4.936 |
| SRR1783602 | moderate drought stress | 4.388 |
| SRR1811619 | moderate drought stress | 4.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.300 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.181 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.159 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.811 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.769 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.879 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.194 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.781 |
| SRR2868004 | Drought Stress (root) | 4.263 |
| SRR2967015 | Control (root) | 3.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.239 |
| SRR9715740 | Leaf | 2.073 |
| SRR9715741 | Leaf | 2.070 |
| SRR9715739 | Root | 0.797 |
| SRR9715742 | Root | 4.226 |
| SRR9715743 | Root | 3.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.099 |
| SRR8749028 | MeJA induced 9h | 14.786 |
| SRR8749029 | MeJA induced 9h | 15.388 |
| SRR8749030 | Uninduced | 17.086 |
| SRR8749031 | Uninduced | 6.900 |
| SRR8749032 | Uninduced | 7.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.100 |
| SRR8400027 | Control - Root | 1.844 |