Gene detail information of Glyur000154s00013442 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11590.1 | 8.00E-84 | |
| NR | XP_003596858.1 | 0 | hypothetical protein MTR_2g086890 [Medicago truncatula] |
| Swissprot | tr|Q66GQ2|Y5162_ARATH | 1.00E-26 | Uncharacterized protein At5g41620 |
| trEMBL | tr|G7IHH1|G7IHH1_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AES67109.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00154 | 295416 | 298102 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.375 |
| SRR1783600 | control | 1.382 |
| SRR1783602 | moderate drought stress | 1.195 |
| SRR1811619 | moderate drought stress | 1.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.713 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.718 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.798 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.908 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.925 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.636 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.439 |
| SRR2868004 | Drought Stress (root) | 2.055 |
| SRR2967015 | Control (root) | 1.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.908 |
| SRR9715740 | Leaf | 0.577 |
| SRR9715741 | Leaf | 2.067 |
| SRR9715739 | Root | 0.052 |
| SRR9715742 | Root | 0.422 |
| SRR9715743 | Root | 0.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.404 |
| SRR8749028 | MeJA induced 9h | 3.719 |
| SRR8749029 | MeJA induced 9h | 4.670 |
| SRR8749030 | Uninduced | 0.535 |
| SRR8749031 | Uninduced | 3.786 |
| SRR8749032 | Uninduced | 1.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.306 |
| SRR8400027 | Control - Root | 2.082 |