Gene detail information of Glyur000154s00013439 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06270.1 | 6.00E-11 | |
| NR | KHN32856.1 | 7.39E-27 | hypothetical protein glysoja_038785 [Glycine soja] |
| trEMBL | tr|I1LTY2|I1LTY2_SOYBN | 3.00E-27 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G31240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00154 | 282908 | 283192 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.109 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.382 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.174 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.880 |
| SRR2868004 | Drought Stress (root) | 4.309 |
| SRR2967015 | Control (root) | 0.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.473 |
| SRR9715740 | Leaf | 34.513 |
| SRR9715741 | Leaf | 45.865 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.116 |
| SRR9715743 | Root | 0.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.730 |
| SRR8749028 | MeJA induced 9h | 31.827 |
| SRR8749029 | MeJA induced 9h | 20.022 |
| SRR8749030 | Uninduced | 289.444 |
| SRR8749031 | Uninduced | 210.741 |
| SRR8749032 | Uninduced | 59.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.243 |
| SRR8400027 | Control - Root | 2.290 |