Gene detail information of Glyur000153s00013706 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G57610.2 | 8.00E-84 | Protein of unknown function (DUF607) |
| NR | XP_003544343.1 | 2.17E-180 | PREDICTED: uncharacterized protein LOC100803689 [Glycine max] |
| Swissprot | tr|Q8VYR0|MCU5_ARATH | 2.00E-108 | Calcium uniporter protein 5, mitochondrial (Precursor) |
| trEMBL | tr|I1MBN2|I1MBN2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G38820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00153 | 262829 | 266164 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000153s00013706.1 | PF04678.8 | DUF607 | 162 | 325 | 2.20E-52 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.283 |
| SRR1783600 | control | 0.266 |
| SRR1783602 | moderate drought stress | 0.368 |
| SRR1811619 | moderate drought stress | 0.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.897 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.791 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.551 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.703 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.260 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.961 |
| SRR2868004 | Drought Stress (root) | 2.059 |
| SRR2967015 | Control (root) | 3.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 80.014 |
| SRR9715740 | Leaf | 22.768 |
| SRR9715741 | Leaf | 40.980 |
| SRR9715739 | Root | 30.096 |
| SRR9715742 | Root | 65.640 |
| SRR9715743 | Root | 59.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.910 |
| SRR8749028 | MeJA induced 9h | 30.408 |
| SRR8749029 | MeJA induced 9h | 32.370 |
| SRR8749030 | Uninduced | 16.308 |
| SRR8749031 | Uninduced | 12.302 |
| SRR8749032 | Uninduced | 12.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.485 |
| SRR8400027 | Control - Root | 6.547 |