Gene detail information of Glyur000153s00013684 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003544338.1 | 4.48E-34 | PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like [Glycine max] |
| Swissprot | tr|O04682|PTI6_SOLLC | 9.00E-07 | Pathogenesis-related genes transcriptional activator PTI6 |
| trEMBL | tr|I1MBL7|I1MBL7_SOYBN | 2.00E-34 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G38610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00153 | 87910 | 88776 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.404 |
| SRR1783600 | control | 19.186 |
| SRR1783602 | moderate drought stress | 22.906 |
| SRR1811619 | moderate drought stress | 22.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.064 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.970 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.200 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.439 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 81.633 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 79.587 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.278 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.599 |
| SRR2868004 | Drought Stress (root) | 34.383 |
| SRR2967015 | Control (root) | 61.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.096 |
| SRR9715740 | Leaf | 37.237 |
| SRR9715741 | Leaf | 37.284 |
| SRR9715739 | Root | 85.720 |
| SRR9715742 | Root | 131.737 |
| SRR9715743 | Root | 113.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 75.559 |
| SRR8749028 | MeJA induced 9h | 16.825 |
| SRR8749029 | MeJA induced 9h | 22.926 |
| SRR8749030 | Uninduced | 3.309 |
| SRR8749031 | Uninduced | 0.699 |
| SRR8749032 | Uninduced | 1.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.962 |
| SRR8400027 | Control - Root | 44.420 |