Gene detail

Gene detail information of Glyur000153s00013681

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G58320.2	2.00E-99	Kinase interacting (KIP1-like) family protein
NR	XP_004490720.1	0	PREDICTED: uncharacterized protein PFB0145c-like isoform X1 [Cicer arietinum]
trEMBL	tr\|G7K0U4\|G7K0U4_MEDTR	0	Kinase interacting (KIP1-like) family protein {ECO:0000313\|EMBL:AES98999.1}

Sequence

Transcript Sequence

>Glyur000153s00013681.1
CTTTCCCTTTGCGTCCCCACTACCAATTGTAATAGTACTACCATCCCCCAACNCCTTATTATTATTAACTCTTGACATTTGACATTTCACAAACCCAGCCTCACACTTCAAATATCTCATTTTTCCCCCATTCTCTCTCTCTCTCTCCCCCTCTATTCCCAGATCCATTGCTTTATCTCGGAGCATCTTCTTCTGCGACCAAACAGGCCCTTCTCTCAAAGTTTCACCAGCTAGCTAGCACTTTCTCTGGCAAATGGCAGCTTCTGGGGTTCAGTCTAACAAGCAAATGAAGAGGTTGGAATCAAGGAAGTCACATTCCTGGTGGTGGGATAGTCACATCAGTCCCAAGAATTCTAAGTGGCTTTCAGAAAATCTTGAAGAGATGGACCGGAATGTGAAGCGAATGTTGAAGCTGATAGAAGAGGATGCAGATTCATTTGCCAAAAGAGCTGAAATGTATTACCAGAAGCGNCCAGAATTGGTTGCTTTGGTTGAGGAGTTTTACCGCGGTTACCGGTCTCTTGCTGAACGTTATGATAACGTGACTGGAGAATTGCGGAAGAATATACCCTCTGATCTCCAATCCCAAGGTTCGGGTATTTCAGACACTGGCTCTGAACCATCCTCTACCTGTGCCTCTTCAAAGAATGGCCGCCGTAAATCTACAAACCGAGCTGCCGGGTTCGATGTCTTTCTTGGCTCAGGGGGAAATGGGTCTGATGTATGCCAAAAAGATGGAGATGAGTCCTCAACTATGACGGATTCCGATGAGGAATCAGACGATTCATCNGTTAACAACTATTCAGGTTTCTCAAGGAATGGTAGTGATCCGGCGATGAACAGAAGAATAACAGAACTGGAAACTGAACTCCGCGAGGTAAAAGAAAAGCTATGGATGCAGGAAGAGGAACAACATGCAGAGGTTTCATCTAAGGGGGCAAGAAACGAGAATGCCGAAGATGTTTATGCCAAAATTAATGCATATGAACAAGAACTGATGATTGCTAAGGAAAAGTTAAGACATTATGAAGAAAAATGCACTAAACTAAAGTCTGAGCTTGAAAATTACAGATCCTTGGATTCGGAAAATATGAATGCTAGTGTTGAATTATCATCAAATAAAGAATACATCAAGACAGAAGGGGAAGCATTAGAGGCTGAAGGAAGCATTGGTGGTGTTGATAAGGAACTGTTTGAGCCAAATAGCGACACTGTGTCACTTGAGAACGAGCTTCAAATCACCAAAGCAAATCTCAAGGCTTCCGAAACTCAGATTGCTTCACTGAAAATCGAGGCCAATAAATCCTCCGAAAGAATTCAGCACCTGCAGGATCAACTCGACTTGGCTCGAAAGGACATTGCTGCTTGGAAAGCCAAATTCAACAGCGAGAAAAGAGAGAGCACCAAACTCCAAGAAAGACTCGCGAGGTTAAAGACTAGCCTAACAGACCGCGATCACGAGATCAGGGATTTGAAAACAGCTGTATCAGATGCAGAGCAGAAAATCTTCCCGGAGAAAGCGCAGTTGAAGGCCGAAATGTCCAAGTTGTTGGAGGAGCGGACTCACTTAGAAGAGCAGATCAGAGAATGGGAATGCCGCGGCCGGTCTTTCGAAGAGGAGATCAGGAACATACAGTCTGAGAAAGTAGAGATGGAGGCAGCACTGAAGGGTGAAATTGAGCTGTTAAAGGCAGAAATTGAACAAAGAGAGATCAATATAAAAGACCTCAATGTAAGCCTTCATACTTTAAAACTAGAGAGAGATAATCTCAATCCTGTAGTTGGTTCACTCAAGGAAGAGGTGAACTCAAGAGATGGTAGGATTGAACANTTGGATATCCATTTGAACCAACTGCACATGGAACATGCACAACTTATTGCTGGAATGGAAGAGGCACATAGACAAATGGAGGAACTGAAATCAAAAGNTAAGCAACTTGAAGAAGAGGTTCAGAGGCAAAAAACTGAGATCTTACAAGGAGCGGAAGAGAAACGTGAGGCCATAAGGCAGCTATGCCTCTCACTCGAGTACTATAGGAGTAGCTATCATATGCTTAGGCAGCATTTTATAGGGCATAAGAGAGTTCCAGTTTTGGCTGCCTAATTAGTAGTAGCAATGGACATGCTTGATTTTCAGTTGCAAATGTANGTTTGGGTCTGTCTAAAAATATGTTTGGCCAAAAAGAACTCTATAGTTACTTTGGATTCAAANGTACTTTTGCAATCTTCTAACAGAAAACCAAACATGCAAAGAACATTTGGAACGTGATCTTCATGTATATTTTTGCTATCTTGAATTCTCTCTATCTGGGATGTCTTTCTTATGCTTTTGGTTTTGATGTATATGAGTCAAGGTTATGAGTACTGAGGAAGTAAGTGATAACCATGTGTTTTGATGGATTAATAATTTTACTCTTTTGGCTTGTTAGCTATACACATGTGCCGGTTNCAGTAAGACCCTTTCTTGAGGGGTCATAGAAGAGTTTGAAAAATCGCTTAGGTTGACCTGATATATGTATATCTACCCTTCTAGTACGATGTGAATGGTTGTTTCTTTTAATGCCGAGTTCCAAGTTGGCTTTTTCTTACAATGAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00153	42715	47067	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000153s00013681.1	PF07765.7	KIP1	22	95	1.70E-40
Glyur000153s00013681.2	PF07765.7	KIP1	22	95	1.70E-40
Glyur000153s00013681.3	PF07765.7	KIP1	22	95	1.70E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	18.118
SRR1783600	control	18.271
SRR1783602	moderate drought stress	15.100
SRR1811619	moderate drought stress	14.854

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	48.374
DRR006520	Root Summer glycyrrhizin high producing strain	48.089
DRR006521	Root Winter glycyrrhizin high producing strain	6.954
DRR006522	Root Winter glycyrrhizin high producing strain	7.064
DRR006523	Root Summer glycyrrhizin low producing strain	101.204
DRR006524	Root Summer glycyrrhizin low producing strain	102.030
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.837
DRR006526	Leaf Summer glycyrrhizin high producing strain	24.402

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	41.471
SRR2868004	Drought Stress (root)	43.660
SRR2967015	Control (root)	40.949

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	58.744
SRR9715740	Leaf	54.779
SRR9715741	Leaf	63.763
SRR9715739	Root	11.229
SRR9715742	Root	64.474
SRR9715743	Root	54.975

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	77.696
SRR8749028	MeJA induced 9h	65.990
SRR8749029	MeJA induced 9h	84.544
SRR8749030	Uninduced	117.145
SRR8749031	Uninduced	101.273
SRR8749032	Uninduced	75.690

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.450
SRR8400027	Control - Root	61.411