Gene detail information of Glyur000152s00012734 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15920.1 | 3.00E-58 | Nodulin MtN3 family protein |
| NR | KEH37225.1 | 1.05E-106 | bidirectional sugar transporter [Medicago truncatula] |
| Swissprot | tr|Q84WN3|SWT17_ARATH | 3.00E-71 | Bidirectional sugar transporter SWEET17 |
| trEMBL | tr|A0A072VGC9|A0A072VGC9_MEDTR | 4.00E-107 | Bidirectional sugar transporter {ECO:0000313|EMBL:KEH37225.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00152 | 278537 | 282238 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000152s00012734.1 | PF03083.11 | MtN3_slv | 6 | 92 | 5.30E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.048 |
| SRR1783600 | control | 0.049 |
| SRR1783602 | moderate drought stress | 0.627 |
| SRR1811619 | moderate drought stress | 0.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.143 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.254 |
| SRR2868004 | Drought Stress (root) | 1.661 |
| SRR2967015 | Control (root) | 1.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.279 |
| SRR9715740 | Leaf | 1.826 |
| SRR9715741 | Leaf | 1.882 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.082 |
| SRR9715743 | Root | 0.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.129 |
| SRR8749029 | MeJA induced 9h | 0.151 |
| SRR8749030 | Uninduced | 0.209 |
| SRR8749031 | Uninduced | 0.102 |
| SRR8749032 | Uninduced | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.155 |
| SRR8400027 | Control - Root | 0.974 |