Gene detail information of Glyur000152s00012731 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49100.1 | 1.00E-29 | |
| NR | XP_002314378.2 | 1.82E-109 | hypothetical protein POPTR_0010s01580g [Populus trichocarpa] |
| trEMBL | tr|B9HXT0|B9HXT0_POPTR | 7.00E-110 | Uncharacterized protein {ECO:0000313|EMBL:EEF00549.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00152 | 269706 | 270956 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.168 |
| SRR1783600 | control | 7.182 |
| SRR1783602 | moderate drought stress | 18.755 |
| SRR1811619 | moderate drought stress | 19.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.122 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.880 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.551 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.721 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.766 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.358 |
| SRR2868004 | Drought Stress (root) | 20.604 |
| SRR2967015 | Control (root) | 18.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.429 |
| SRR9715740 | Leaf | 6.763 |
| SRR9715741 | Leaf | 4.513 |
| SRR9715739 | Root | 3.571 |
| SRR9715742 | Root | 8.760 |
| SRR9715743 | Root | 8.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.496 |
| SRR8749028 | MeJA induced 9h | 0.513 |
| SRR8749029 | MeJA induced 9h | 0.553 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.462 |
| SRR8400027 | Control - Root | 16.410 |