Gene detail information of Glyur000152s00012721 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16640.1 | 1.00E-73 | translationally controlled tumor protein |
| NR | XP_010921684.1 | 1.73E-108 | PREDICTED: translationally-controlled tumor protein homolog [Elaeis guineensis] |
| Swissprot | tr|P28014|TCTP_MEDSA | 3.00E-108 | Translationally-controlled tumor protein homolog |
| trEMBL | tr|B3TM15|B3TM15_ELAGV | 6.00E-109 | Translationally controlled tumor protein {ECO:0000313|EMBL:ACF06596.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00152 | 222735 | 225173 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000152s00012721.1 | PF00838.12 | TCTP | 1 | 164 | 1.30E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1900.275 |
| SRR1783600 | control | 1911.202 |
| SRR1783602 | moderate drought stress | 3051.566 |
| SRR1811619 | moderate drought stress | 3038.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3173.080 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3134.450 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1073.034 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1043.663 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4180.558 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4184.927 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 157.665 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 158.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 883.280 |
| SRR2868004 | Drought Stress (root) | 877.763 |
| SRR2967015 | Control (root) | 975.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 297.384 |
| SRR9715740 | Leaf | 345.705 |
| SRR9715741 | Leaf | 436.431 |
| SRR9715739 | Root | 3222.976 |
| SRR9715742 | Root | 2127.117 |
| SRR9715743 | Root | 2277.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 831.084 |
| SRR8749028 | MeJA induced 9h | 382.272 |
| SRR8749029 | MeJA induced 9h | 605.171 |
| SRR8749030 | Uninduced | 372.847 |
| SRR8749031 | Uninduced | 244.331 |
| SRR8749032 | Uninduced | 659.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1340.019 |
| SRR8400027 | Control - Root | 1452.339 |