Gene detail

Gene detail information of Glyur000152s00012718

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G62700.1	multidrug resistance-associated protein 10
NR	XP_004487850.1	PREDICTED: ABC transporter C family member 14-like [Cicer arietinum]
COG	NP_969385.1	multidrug ABC transporter permease/ATPase [Bdellovibrio bacteriovorus HD100]
Swissprot	tr\|Q7DM58\|AB4C_ARATH	ABC transporter C family member 4
trEMBL	tr\|I1L0Z7\|I1L0Z7_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G04980.1}

Sequence

Transcript Sequence

>Glyur000152s00012718.1
ATGGAACTTATTATATTAACGTTAATGCTCCACCCTTCAAGCAAGCCAAATAAAAAAGACATTTTTTTTCTTTCACACCACAACACTCACTGTGTATTTCAGACCCCACACTCATATTTCCACATTTTCCCTTCCACCCTTTCCTTGTTNCCATTGTATTTCACACCCCTTTTGCCTCCTCAACATAGATTACCAACAACAACACACTTGTTTCTTGCTCTGGTTCAAATCATGAGAGCATCTATTCTCTTCCTCCACCACCACCATCATCATGTATGAAAATCTTTCACAGTTGCACACCGATTCCTGATAAAGTAATCTTATAGGTGCAATTACACAACACCATATCACNTAATCTTTTTGAATAACATGTCTTCTCCTTCCTGGCTCACCTCTCCTTCATGTACCCTTTTAGCCATAGATTCATCTTCTTCTTCTTCAACACCACAACTCATAGTTCAGTGGTTAAGGTTTATCTTCCTATCTCCATGTCCTCAGAGAGTTCTTCTATCTACCCTTGATCTCTTATTCTTGCTTTCCCTTCTAGCCTTTGCAGCTCACAGGTTCTATTCTCGATTCACTTCCAATACCAACTCCAACTCCTCCATCACAAAACCCCTTCTGCAGGAGAAGGACTCAGACTATAGAGTTACCTTGTGGTTCAAACTACCCTTGTTGGTAACCGCCCTTTTGGCTATAGCTTACACGGTTCTAGGAATCTTGGCTTTCACTCAAACCAACCTTGCCTCATCATGGAGACAAATAGAGGCACTGTTTCGTTTGTCTCAAGCAATAGCCAACATAGTGGTAGTGGNTCTAATGGTACATGAGAAGAAGTTCAAAGCTTCTAAGCACCCTTTGTCACTGAGAATCTATTGGATAGCAAACTTTGTGCTTGCTTGCTTTTTTGCTGCTTCAGCCATTGTTCGCTTTGTAACTGTTGGTGAAGAGTGGTTNGAGCTTAGTTTGAGAATAGATGACATATTCTCATTGGTTAATCTTCCATTATTTGTGTTCTTTTTTGTAATAGCCATAAAAGGGTCATCAGGGATTCATGTAATCAGAATATCTGATGTAGTAACAACAACATATCAGTTGCTTTCCACTGATAGGACTTTGAGTCCTTATGCTAGGGCTTCAATTATCTCCAAAACTGTGTGGCTTTGGATGAACCCTTTGATCAACAAAGGGTACAAAACACCCCTCAAACTGGAAGATGTTCCCTCACTTCCTTTGGAATTCCGAGCAGAAAAGATGTCAGAGCTTTTTCAAAGCAAATGGCCAAAGCCTGAGGAAAACAGCAAGCATCCGGTTGGACTCACCTTGTTTAGGTGCTTTTGGAAACACATAGCTTTNACTGGCTTCCTTGCAATCATTAGGCTTTCGGTTATGTACGTTGGCCCAATGCTGATTCAGAGTTTTGTTGACTACACCTCAAGGACAGACAGNACTCCCAATGAAGGTGTTGTTTTGGTGTTGATCCTGTTTGCAGCAAAGTCAATTGAAGTCCTCACTGTCCACCAATTCAACTTNAATTCTCAGAAACTCGGCATGCTCATTCGTTCCAGCATCATCACTTCTGTGTACAAGAAAGGGTTGAGGCTTTCAAGCTCTTCAAGGCAAGCTCATGGGACTGGCCAGATTGTGAACCACATGGCTGTTGATGCTCAGCAACTCTCAGATTTGATGATGCAGTTTCACCCTATATGGATGATGCCATTGCAGGTTGCTGCTGCATTGGCCCTCATGTATGCCTATGTTGGTTTATCTGTACTTTCAGCCCTGATTGGAACTTCCCTAGTGTTTCTCTTCACTCTCTTTCGCACCAAGAGGAGCAACAACTTCCAGTTCCGGATAATGATGAGCCGCGACTTGAGGATGAAGGCAATCAATGAGTTGCTCAACAACATGCGTGTCATCAAATTCCAAGCGTGGGAGGAGTATTTCNGTAACAAGATTCGTCAGTTTCGCGAGGCTGAGCATGGTTGGATTGGCAAGTTCTTGTACTATTTTGCTGTTAACATGGGAGTTCTAAGCACTGCTCCACTTACTATAACTGTTCTTACCTTTGGAACNGCAACTTTTATGGGTATTCCTCTGAATGCTGGCACTGTGTTCACAATAACTTCGGTGATCAAGATACTGCAAGAGCCGGTAAGGACCTTCCCACAGGCTCTTATCCAGATTTCTCAAGCAGTGATTTCTTTGGGGAGGTTGGATGAGTTCATGATGAGTAAGGAAATGGATGAGGATGCTGTGGAAAGAAAAGACAACTGTGATAGTGACATAGCTGTGGAGATAAAAGATGGGAAATTCTCGTGGGATGATCAGGATGGGAATGAGGCTCTGAAAGTGGAGGAGTTGGAAATTAGGAAAGGGGACCATGCTGCTGTTGTGGGAACTGTAGGGTCAGGCAAGTCTTCATTACTGGCTTCTGTGTTAGGGGAAATGTTCAAGATCTCAGGAAAGGTGAGAGTTTGTGGGACGATCGCGTATGTAGCACAGACATCATGGATTCAGAATGCAACCATCCAGGAAAACATACTGTTTGGTTTGCCAATGAATAGGGAGAAGTACAGGGAAGCCATAAGAGTGTGCTGCCTGGAAAAGGATCTTGAAATGATGGATGATGGAGACAAAACTGAGATCGGAGAGCGGGGTATTAACCTCAGTGGCGGCCAGAAGCAACGTATTCAACTTGCTAGAGCTGTATACCAAGACTGTGACATCTATCTCCTTGATGATGTGTTCAGTGCTGTTGATGCCCAAACAGGATCATTTATCTTTAAGGAATGTATCATGGGAGCTCTCAAAGATAAGACCGTTTTNCTTGTAACCCACCAAGTTGACTTCTTGCATAATGTTGATTCTATAATGGTGATGCGAGATGGGACAATAGTGCAAACTGGAAAGTATGATGAACTTCTCAAAGCAGGCCTTGATTTTGGTGCACTTGTGGCTGCTCATGAATCCTCTATGGAGATTGCAGAAACAAGTGACAAAGGTGGTGATGATTCTGGCCAGTCTCCAAAACTGGCTCGTATCCCTTCAAAAGAAAAGGAAAGCACAGGGGAAAAGCAGCCTCAGGATCAATCTAANTCTGATGATAAGGCTGCAGCGAAGCTCATTGAAGAGGAGGAAAGAGAAACCGGCCGTGTGAACCTTAAAGTGTATAAACATTACTTCACTGAAGCATTTGGATGGTGGGGTATAGCACTGATGGTGGCAATGTCTCTGGCTTGGATGTTGTCCTTTTTAGCTGGTGACTACTGGCTAGCATTTGCAACTTCAGAAGATTCTGGCATTCCTTCTTTCACCTTCATTATGGTCTATGCTATCATAGCAGTTGTTGCATGTGTAGTGGTGATGGCAAGGGNTTTTTTATTTACATATTGGGGTCTAAAGACATCTCAAAGCTTCTTTGTTGGAATGATTCAAAGCATCCTGCANGCACCAATGTCATTCTTTGACACTACTCCTTCTGGCAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGGTCGATATATCAATTCCAATGTTAGTAAACTTTGTAATGGTGGCATACTTATCATTGTTCAGCATCCTCATTGTCACATGCCAAAATTCTTGGGAGACGGTCTTCCTCTTAATTCCACTGTTTTGGCTGAATAACTGGTATCGGAAATATTACCTTGCAACTTCTCGCGAACTGACTCGCCTTGATTCTATCACAAAAGCTCCCGTGATTCATCACTTTTCAGAGACCATTTCCGGTGTTATGACAATCCGTAGCTTCAGGAAGCAGGGTGAATTTTGTCAGGAAAATATTGACAGGGTCAACGCAAGTCTGAGAATGGATTTCCACAACAATGGAGCAAATGAATGGCTTGGTTTTCGCCTGGACTATATGGGAGTGGTTTTCCTTTGCATTGCCACCGTTTTCATGATCTTTCTGCCTAGTGCTATTATTAGGCCAGAATATGTTGGTATGTCTCTATCCTATGGCCTGGCTCTCAGTGGTCTCTTGTCATTTACCATAACTATGACTTGCTCTGTTGAGAACAAAATGGTTTCAGTTGAGAGAATAAAGCAGTTTACCAACCTTCCATCAGAAGCTCCNTGGAAAATAGCTGATAAGTGTCCTCCTCAGAGTTGGCCCAGTCATGGCAATATCGAGTTAAATAATTTACAGGTTCGGTATAGGCCAAACACTCCTCTAGTTCTTAAGGGAATCTCTCTGACCATTGAAGGAGGAGAAAAGGTTGGTGTTGTTGGGCGTACAGGGAGTGGGAAATCAACCCTCATCCAGGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGAAAATAATCATTGATGGGGTCAACATTTGCACTGTTGGCCTTCATGATGTGAGGTCTCGTTTTGGGATCATTCCACAAGAGCCTGTCCTCTTTCAAGGAACCGTGAGAAGCAACATTGACCCCCTTGGATTGTATTCAGAAGAAGAAGTTTGGAAGAGCCTTGAGCGGTGCCAACTGAAGGACGTGGTGGCTGCAAAGCCTGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGGCAGCTTCTGTGTTTGGGAAGGATCATGTTAAAACGCAGCAAAATACTGTTCATGGATGAGGCAACAGCATCCGTTGATTCACAAACTGATGCTGTTATACAAAAGATCATCCGAGAGGACTTTGCGGATCGTACAATTGTTACCATTGCTCACAGAATACCAACCGTTATGGACTGCGACAAAGTTTTGGTCATTGATGCAGGCTTTGCGAAGGAATTTGACAAGCCAGCACGCTTGATTGAAAGACCTTCGCTTTTTGGGGCATTGGTTAAGGAGTACTCTAATAGATCAGCTTAATGTAGGTGATTGCTACCTAGGGATGGTAGATCAATTTTTTTTCAAGATAATCACGTTCTACCCTTTCTGCAGTTCTATAATTTGACTAGGATAATATGTAA

Protein Sequence

>Glyur000152s00012718.1
MSSPSWLTSPSCTLLAIDSSSSSSTPQLIVQWLRFIFLSPCPQRVLLSTLDLLFLLSLLAFAAHRFYSRFTSNTNSNSSITKPLLQEKDSDYRVTLWFKLPLLVTALLAIAYTVLGILAFTQTNLASSWRQIEALFRLSQAIANIVVVXLMVHEKKFKASKHPLSLRIYWIANFVLACFFAASAIVRFVTVGEEWXELSLRIDDIFSLVNLPLFVFFFVIAIKGSSGIHVIRISDVVTTTYQLLSTDRTLSPYARASIISKTVWLWMNPLINKGYKTPLKLEDVPSLPLEFRAEKMSELFQSKWPKPEENSKHPVGLTLFRCFWKHIAXTGFLAIIRLSVMYVGPMLIQSFVDYTSRTDXTPNEGVVLVLILFAAKSIEVLTVHQFNXNSQKLGMLIRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWMMPLQVAAALALMYAYVGLSVLSALIGTSLVFLFTLFRTKRSNNFQFRIMMSRDLRMKAINELLNNMRVIKFQAWEEYFXNKIRQFREAEHGWIGKFLYYFAVNMGVLSTAPLTITVLTFGTATFMGIPLNAGTVFTITSVIKILQEPVRTFPQALIQISQAVISLGRLDEFMMSKEMDEDAVERKDNCDSDIAVEIKDGKFSWDDQDGNEALKVEELEIRKGDHAAVVGTVGSGKSSLLASVLGEMFKISGKVRVCGTIAYVAQTSWIQNATIQENILFGLPMNREKYREAIRVCCLEKDLEMMDDGDKTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAQTGSFIFKECIMGALKDKTVXLVTHQVDFLHNVDSIMVMRDGTIVQTGKYDELLKAGLDFGALVAAHESSMEIAETSDKGGDDSGQSPKLARIPSKEKESTGEKQPQDQSXSDDKAAAKLIEEEERETGRVNLKVYKHYFTEAFGWWGIALMVAMSLAWMLSFLAGDYWLAFATSEDSGIPSFTFIMVYAIIAVVACVVVMARXFLFTYWGLKTSQSFFVGMIQSILXAPMSFFDTTPSGRILSRVSTDILWVDISIPMLVNFVMVAYLSLFSILIVTCQNSWETVFLLIPLFWLNNWYRKYYLATSRELTRLDSITKAPVIHHFSETISGVMTIRSFRKQGEFCQENIDRVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATVFMIFLPSAIIRPEYVGMSLSYGLALSGLLSFTITMTCSVENKMVSVERIKQFTNLPSEAPWKIADKCPPQSWPSHGNIELNNLQVRYRPNTPLVLKGISLTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGVNICTVGLHDVRSRFGIIPQEPVLFQGTVRSNIDPLGLYSEEEVWKSLERCQLKDVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIVTIAHRIPTVMDCDKVLVIDAGFAKEFDKPARLIERPSLFGALVKEYSNRSA

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00152	187160	195531	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0005524 ATP binding

GO:0016887 ATPase activity

GO:0042626 ATPase activity, coupled to transmembrane movement of substances

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000152s00012718.1	PF00664.18	ABC_membrane	331	596	3.70E-33
Glyur000152s00012718.1	PF00005.22	ABC_tran	664	793	1.40E-16
Glyur000152s00012718.1	PF00664.18	ABC_membrane	949	1216	1.80E-23
Glyur000152s00012718.1	PF00005.22	ABC_tran	1280	1428	3.90E-29

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	123.986
SRR1783600	control	124.229
SRR1783602	moderate drought stress	54.679
SRR1811619	moderate drought stress	54.444

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	63.575
DRR006520	Root Summer glycyrrhizin high producing strain	62.895
DRR006521	Root Winter glycyrrhizin high producing strain	73.268
DRR006522	Root Winter glycyrrhizin high producing strain	70.977
DRR006523	Root Summer glycyrrhizin low producing strain	45.913
DRR006524	Root Summer glycyrrhizin low producing strain	45.805
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.160
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.189

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	148.979
SRR2868004	Drought Stress (root)	83.649
SRR2967015	Control (root)	85.899

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	16.516
SRR9715740	Leaf	15.501
SRR9715741	Leaf	15.441
SRR9715739	Root	47.902
SRR9715742	Root	192.169
SRR9715743	Root	162.756

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.987
SRR8749028	MeJA induced 9h	15.395
SRR8749029	MeJA induced 9h	4.549
SRR8749030	Uninduced	6.795
SRR8749031	Uninduced	1.347
SRR8749032	Uninduced	2.365

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	131.066
SRR8400027	Control - Root	136.336