Gene detail information of Glyur000152s00012717 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15830.1 | 2.00E-75 | ARM repeat superfamily protein |
| NR | KHN14621.1 | 1.50E-154 | Protein FAM179B-like protein [Glycine soja] |
| trEMBL | tr|I1MGL6|I1MGL6_SOYBN | 4.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00152 | 176876 | 178778 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.356 |
| SRR1783600 | control | 10.571 |
| SRR1783602 | moderate drought stress | 5.737 |
| SRR1811619 | moderate drought stress | 5.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.107 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.041 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.394 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.458 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.386 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.422 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.179 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.779 |
| SRR2868004 | Drought Stress (root) | 11.895 |
| SRR2967015 | Control (root) | 16.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.188 |
| SRR9715740 | Leaf | 1.105 |
| SRR9715741 | Leaf | 1.301 |
| SRR9715739 | Root | 6.043 |
| SRR9715742 | Root | 2.358 |
| SRR9715743 | Root | 3.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.770 |
| SRR8749028 | MeJA induced 9h | 20.297 |
| SRR8749029 | MeJA induced 9h | 12.673 |
| SRR8749030 | Uninduced | 3.798 |
| SRR8749031 | Uninduced | 1.321 |
| SRR8749032 | Uninduced | 0.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.888 |
| SRR8400027 | Control - Root | 17.030 |